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Deterministic Somatic Cell Reprogramming Involves Continuous Transcriptional Changes Governed by Myc and Epigenetic-Driven Modules.
Zviran A, Mor N, Rais Y, Gingold H, Peles S, Chomsky E, Viukov S, Buenrostro JD, Scognamiglio R, Weinberger L, Manor YS, Krupalnik V, Zerbib M, Hezroni H, Jaitin DA, Larastiaso D, Gilad S, Benjamin S, Gafni O, Mousa A, Ayyash M, Sheban D, Bayerl J, Aguilera-Castrejon A, Massarwa R, Maza I, Hanna S, Stelzer Y, Ulitsky I, Greenleaf WJ, Tanay A, Trumpp A, Amit I, Pilpel Y, Novershtern N, Hanna JH. Zviran A, et al. Among authors: greenleaf wj. Cell Stem Cell. 2019 Feb 7;24(2):328-341.e9. doi: 10.1016/j.stem.2018.11.014. Epub 2018 Dec 13. Cell Stem Cell. 2019. PMID: 30554962 Free PMC article.
ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide.
Buenrostro JD, Wu B, Chang HY, Greenleaf WJ. Buenrostro JD, et al. Among authors: greenleaf wj. Curr Protoc Mol Biol. 2015 Jan 5;109:21.29.1-21.29.9. doi: 10.1002/0471142727.mb2129s109. Curr Protoc Mol Biol. 2015. PMID: 25559105 Free PMC article.
Transient acquisition of pluripotency during somatic cell transdifferentiation with iPSC reprogramming factors.
Maza I, Caspi I, Zviran A, Chomsky E, Rais Y, Viukov S, Geula S, Buenrostro JD, Weinberger L, Krupalnik V, Hanna S, Zerbib M, Dutton JR, Greenleaf WJ, Massarwa R, Novershtern N, Hanna JH. Maza I, et al. Among authors: greenleaf wj. Nat Biotechnol. 2015 Jul;33(7):769-74. doi: 10.1038/nbt.3270. Epub 2015 Jun 22. Nat Biotechnol. 2015. PMID: 26098448 Free PMC article.
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing.
Chen X, Shen Y, Draper W, Buenrostro JD, Litzenburger U, Cho SW, Satpathy AT, Carter AC, Ghosh RP, East-Seletsky A, Doudna JA, Greenleaf WJ, Liphardt JT, Chang HY. Chen X, et al. Among authors: greenleaf wj. Nat Methods. 2016 Dec;13(12):1013-1020. doi: 10.1038/nmeth.4031. Epub 2016 Oct 17. Nat Methods. 2016. PMID: 27749837 Free PMC article.
Single-cell epigenomic variability reveals functional cancer heterogeneity.
Litzenburger UM, Buenrostro JD, Wu B, Shen Y, Sheffield NC, Kathiria A, Greenleaf WJ, Chang HY. Litzenburger UM, et al. Among authors: greenleaf wj. Genome Biol. 2017 Jan 24;18(1):15. doi: 10.1186/s13059-016-1133-7. Genome Biol. 2017. PMID: 28118844 Free PMC article.
178 results