Ligand binding to domain-3 of human serum albumin: a chemometric analysis

J Comput Aided Mol Des. 2003 Feb-Apr;17(2-4):93-102. doi: 10.1023/a:1025305520585.

Abstract

A detailed chemometric analysis of ligand binding to domain-3A of human serum albumin is described. NMR and fluorescence data on a set of 889 chemically diverse compounds were used to develop a group contribution model based on 74 chemical fragments that is in good agreement with the experimental data (R2 = 0.94, Q2 = 0.90). The structural descriptors used in this analysis comprise a convenient look-up table for quantitatively estimating the effect that a particular group will have on albumin binding. This information can be valuable for optimizing a particular series of compounds for drug development.

Publication types

  • Comparative Study

MeSH terms

  • Binding Sites
  • Drug Design
  • Humans
  • Ligands
  • Models, Chemical
  • Nuclear Magnetic Resonance, Biomolecular
  • Peptide Fragments / metabolism
  • Protein Binding
  • Protein Structure, Tertiary
  • Quantitative Structure-Activity Relationship
  • Serum Albumin / chemistry
  • Serum Albumin / metabolism*
  • Spectrometry, Fluorescence

Substances

  • Ligands
  • Peptide Fragments
  • Serum Albumin