The aim of this study was to evaluate the impact and contribution of various drying surfaces (soil, cement, and tarpaulin) and raking frequencies (1 and 4/day) on the incidence of toxigenic molds, ochratoxin A (OTA) production, and on the overall cup quality during preparation of arabica and robusta coffee cherry in India. Two individual experimental batches (run 1 at the begin of harvest and run 2 at the end of harvest) were set up for the study. Results showed high incidence of molds in coffee dried on soil surface compared with that on cement and tarpaulin surfaces. In both arabica and robusta, OTA could be detected in Aspergillus ochraceus contaminated samples at the end of harvest. Raking of the cherries 4 times/day showed lower fungal incidence with no OTA levels detected. Overall, coffee cherry prepared by drying on tarpaulin surface with 4 rakings/day showed lower OTA and fungal incidence with good and acceptable cup quality, and this is recommended to be practiced at the farm level.