A genetic screen for mutants defective in IAA1-LUC degradation in Arabidopsis thaliana reveals an important requirement for TOPOISOMERASE6B in auxin physiology

Plant Signal Behav. 2014;9(10):e972207. doi: 10.4161/psb.29850.

Abstract

Many plant growth and developmental processes are modulated by the hormone auxin. Auxin-modulated proteolysis of Aux/IAAs, a family of transcriptional repressors, represents a major mode of auxin action. Auxin facilitates the interaction of Aux/IAAs with TIR1/AFB F-box proteins, promoting their ubiquitination by the SCF(TIR1/AFB) ubiquitin E3 ligase leading to subsequent degradation by the 26S proteasome. To identify new genes regulating Aux/IAA proteolysis in Arabidopsis thaliana, we took a genetic approach, identifying individuals with altered degradation of an IAA1-luciferase fusion protein (IAA1-LUC). A mutant with 2-fold slower IAA1-LUC degradation rate compared with wild-type was isolated. Positional cloning identified the mutant as an allele of TOPOISOMERASE6B, named top6b-7. TOP6B encodes a subunit of a plant and archea-specific enzyme regulating endoreduplication, DNA damage repair and transcription in plants. T-DNA insertion alleles (top6b-8 and top6b-9) were also analyzed. top6b-7 seedlings are less sensitive to exogenous auxin than wild-type siblings in primary root growth assays, and experiments with DR5:GUS. Additionally, top6b-7 seedlings have a 40% reduction in the amount of endogenous IAA. These data suggest that increased IAA1-LUC half-life in top6b-7 probably results from a combination of both lower endogenous IAA levels and reduced sensitivity to auxin.

Keywords: 2, 4-D, 2, 4-dichlorophenoxyacetic acid; Arabidopsis thaliana; Aux/IAA; DR5:GUS; IAA, indole-3-acetic acid; IAA1-LUC, IAA1-luciferase fusion protein; LUC, luciferase; TOPOISOMERASE6B; UPS, ubiquitin proteasome system; auxin; indole-3-acetic acid; luciferase fusions; protein degradation; top6b, TOPOISOMERASE6B.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Arabidopsis / enzymology
  • Arabidopsis / genetics
  • Arabidopsis / growth & development
  • Arabidopsis / physiology*
  • Arabidopsis Proteins / chemistry
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Base Sequence
  • Chromosome Mapping
  • DNA, Bacterial / genetics
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism*
  • Genetic Testing*
  • Glucuronidase / metabolism
  • Indoleacetic Acids / metabolism*
  • Luciferases / metabolism
  • Molecular Sequence Data
  • Mutagenesis, Insertional / genetics
  • Mutation / genetics*
  • Nuclear Proteins / chemistry
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Phenotype
  • Plant Roots / growth & development
  • Proteolysis*
  • Recombinant Fusion Proteins

Substances

  • Arabidopsis Proteins
  • DNA, Bacterial
  • DNA-Binding Proteins
  • IAA1 protein, Arabidopsis
  • Indoleacetic Acids
  • Nuclear Proteins
  • Recombinant Fusion Proteins
  • T-DNA
  • Luciferases
  • Glucuronidase