TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities

Cell Rep. 2016 May 17;15(7):1566-1579. doi: 10.1016/j.celrep.2016.04.044. Epub 2016 May 5.

Abstract

Dioxygenases of the TET family impact genome functions by converting 5-methylcytosine (5mC) in DNA to 5-hydroxymethylcytosine (5hmC). Here, we identified TET2 as a crucial regulator of mast cell differentiation and proliferation. In the absence of TET2, mast cells showed disrupted gene expression and altered genome-wide 5hmC deposition, especially at enhancers and in the proximity of downregulated genes. Impaired differentiation of Tet2-ablated cells could be relieved or further exacerbated by modulating the activity of other TET family members, and mechanistically it could be linked to the dysregulated expression of C/EBP family transcription factors. Conversely, the marked increase in proliferation induced by the loss of TET2 could be rescued exclusively by re-expression of wild-type or catalytically inactive TET2. Our data indicate that, in the absence of TET2, mast cell differentiation is under the control of compensatory mechanisms mediated by other TET family members, while proliferation is strictly dependent on TET2 expression.

Keywords: DNA hydroxymethylation; TET; differentiation; epigenetics; mast cells; proliferation.

MeSH terms

  • 5-Methylcytosine / analogs & derivatives
  • 5-Methylcytosine / metabolism
  • Ascorbic Acid / pharmacology
  • Biocatalysis* / drug effects
  • CCAAT-Enhancer-Binding Proteins / metabolism
  • Cell Differentiation* / drug effects
  • Cell Differentiation* / genetics
  • Cell Proliferation / drug effects
  • Cell Proliferation / genetics
  • Cytokines / metabolism
  • DNA-Binding Proteins / deficiency
  • DNA-Binding Proteins / metabolism*
  • Dioxygenases
  • Gene Deletion
  • Gene Expression Regulation
  • Gene Knockdown Techniques
  • Genome
  • HEK293 Cells
  • Humans
  • Male
  • Mast Cells / cytology*
  • Mast Cells / drug effects
  • Mast Cells / metabolism*
  • Proto-Oncogene Proteins / deficiency
  • Proto-Oncogene Proteins / metabolism*
  • Sequence Analysis, RNA
  • Transcription, Genetic

Substances

  • CCAAT-Enhancer-Binding Proteins
  • CEBPA protein, mouse
  • Cytokines
  • DNA-Binding Proteins
  • Proto-Oncogene Proteins
  • 5-hydroxymethylcytosine
  • 5-Methylcytosine
  • Dioxygenases
  • Tet2 protein, mouse
  • Tet3 protein, mouse
  • Ascorbic Acid