MRB10130 is a RESC assembly factor that promotes kinetoplastid RNA editing initiation and progression

RNA. 2019 Sep;25(9):1177-1191. doi: 10.1261/rna.071902.119. Epub 2019 Jun 20.

Abstract

Uridine insertion deletion editing in kinetoplastid protozoa requires a complex machinery, a primary component of which is the RNA editing substrate binding complex (RESC). RESC contains two modules termed GRBC (guide RNA binding complex) and REMC (RNA editing mediator complex), although how interactions between these modules and their mRNA and gRNA binding partners are controlled is not well understood. Here, we demonstrate that the ARM/HEAT repeat containing RESC protein, MRB10130, controls REMC association with mRNA- and gRNA-loaded GRBC. High-throughput sequencing analyses show that MRB10130 functions in both initiation and 3' to 5' progression of editing through gRNA-defined domains. Editing intermediates that accumulate upon MRB10130 depletion significantly intersect those in cells depleted of another RESC organizer, MRB7260, but are distinct from those in cells depleted of specific REMC proteins. We present a model in which MRB10130 coordinates numerous protein-protein and protein-RNA interactions during editing progression.

Keywords: Trypanosoma brucei; guide RNA; kinetoplastid; mitochondria; uridine insertion/deletion RNA editing.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Cell Line
  • Protein Interaction Domains and Motifs / genetics
  • Protozoan Proteins / genetics
  • RNA Editing / genetics*
  • RNA Interference / physiology
  • RNA, Guide, Kinetoplastida / genetics
  • RNA, Messenger / genetics
  • RNA, Protozoan / genetics
  • Trypanosoma brucei brucei / genetics
  • Uridine / genetics

Substances

  • Protozoan Proteins
  • RNA, Messenger
  • RNA, Protozoan
  • Uridine
  • RNA, Guide, Kinetoplastida