The complete plastid genome of Rhamnus taquetii, an endemic shrub on the Jeju Island of Korea

Mitochondrial DNA B Resour. 2020 Jan 29;5(1):924-926. doi: 10.1080/23802359.2020.1719933.

Abstract

Rhamnus taquetii (family Rhamnaceae) is a shrub , endemic to Korea. Here, the R. taquetii plastid genome was found to be 161,205 bp long and consists of quadripartite structures; a large single-copy region of 89,373 bp, a small single-copy region of 18,936 bp, and a pair of inverted repeat regions of 26,448 bp each. The GC content of the sequence was found to be 37.1%. The plastid genome was found to harbor 129 genes, including 84 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes. On the phylogenetic tree of Rosales (based on 63 protein-coding genes), Rhamnaceaewas found to be monophyletic.

Keywords: Endemic species; Rhamnaceae; Rhamnus taquetii; plastid genome.

Grants and funding

This work was supported by a scientific research fund from an Inha University Research Grant (2019).