Unsupervised classification of brain-wide axons reveals the presubiculum neuronal projection blueprint

Nat Commun. 2024 Feb 20;15(1):1555. doi: 10.1038/s41467-024-45741-x.

Abstract

We present a quantitative strategy to identify all projection neuron types from a given region with statistically different patterns of anatomical targeting. We first validate the technique with mouse primary motor cortex layer 6 data, yielding two clusters consistent with cortico-thalamic and intra-telencephalic neurons. We next analyze the presubiculum, a less-explored region, identifying five classes of projecting neurons with unique patterns of divergence, convergence, and specificity. We report several findings: individual classes target multiple subregions along defined functions; all hypothalamic regions are exclusively targeted by the same class also invading midbrain and agranular retrosplenial cortex; Cornu Ammonis receives input from a single class of presubicular axons also projecting to granular retrosplenial cortex; path distances from the presubiculum to the same targets differ significantly between classes, as do the path distances to distinct targets within most classes; the identified classes have highly non-uniform abundances; and presubicular somata are topographically segregated among classes. This study thus demonstrates that statistically distinct projections shed light on the functional organization of their circuit.

MeSH terms

  • Animals
  • Axons* / physiology
  • Brain
  • Hippocampus / physiology
  • Mice
  • Neurons / physiology
  • Parahippocampal Gyrus*