de Vries AH - Search Results

1

Molecular dynamics simulations of phospholipid bilayers: Influence of artificial periodicity, system size, and simulation time.

de Vries AH, Chandrasekhar I, van Gunsteren WF, Hünenberger PH. de Vries AH, et al. J Phys Chem B. 2005 Jun 16;109(23):11643-52. doi: 10.1021/jp0507952. J Phys Chem B. 2005. PMID: 16852429

2

Molecular dynamics simulation of the spontaneous formation of a small DPPC vesicle in water in atomistic detail.

de Vries AH, Mark AE, Marrink SJ. de Vries AH, et al. J Am Chem Soc. 2004 Apr 14;126(14):4488-9. doi: 10.1021/ja0398417. J Am Chem Soc. 2004. PMID: 15070345 Free article.

3

Molecular structure of the lecithin ripple phase.

de Vries AH, Yefimov S, Mark AE, Marrink SJ. de Vries AH, et al. Proc Natl Acad Sci U S A. 2005 Apr 12;102(15):5392-6. doi: 10.1073/pnas.0408249102. Epub 2005 Apr 4. Proc Natl Acad Sci U S A. 2005. PMID: 15809443 Free PMC article.

4

Comparison of atomic-level and coarse-grained models for liquid hydrocarbons from molecular dynamics configurational entropy estimates.

Baron R, de Vries AH, Hünenberger PH, van Gunsteren WF. Baron R, et al. Among authors: de vries ah. J Phys Chem B. 2006 Apr 27;110(16):8464-73. doi: 10.1021/jp055888y. J Phys Chem B. 2006. PMID: 16623533

5

Configurational entropies of lipids in pure and mixed bilayers from atomic-level and coarse-grained molecular dynamics simulations.

Baron R, de Vries AH, Hünenberger PH, van Gunsteren WF. Baron R, et al. Among authors: de vries ah. J Phys Chem B. 2006 Aug 10;110(31):15602-14. doi: 10.1021/jp061627s. J Phys Chem B. 2006. PMID: 16884285

6

Comparison of thermodynamic properties of coarse-grained and atomic-level simulation models.

Baron R, Trzesniak D, de Vries AH, Elsener A, Marrink SJ, van Gunsteren WF. Baron R, et al. Among authors: de vries ah. Chemphyschem. 2007 Feb 19;8(3):452-61. doi: 10.1002/cphc.200600658. Chemphyschem. 2007. PMID: 17290360 Free article.

7

The MARTINI force field: coarse grained model for biomolecular simulations.

Marrink SJ, Risselada HJ, Yefimov S, Tieleman DP, de Vries AH. Marrink SJ, et al. Among authors: de vries ah. J Phys Chem B. 2007 Jul 12;111(27):7812-24. doi: 10.1021/jp071097f. Epub 2007 Jun 15. J Phys Chem B. 2007. PMID: 17569554 Free article.

8

Location, tilt, and binding: a molecular dynamics study of voltage-sensitive dyes in biomembranes.

Hinner MJ, Marrink SJ, de Vries AH. Hinner MJ, et al. Among authors: de vries ah. J Phys Chem B. 2009 Dec 3;113(48):15807-19. doi: 10.1021/jp907981y. J Phys Chem B. 2009. PMID: 19894688

9

Martini Coarse-Grained Force Field: Extension to Carbohydrates.

López CA, Rzepiela AJ, de Vries AH, Dijkhuizen L, Hünenberger PH, Marrink SJ. López CA, et al. Among authors: de vries ah. J Chem Theory Comput. 2009 Dec 8;5(12):3195-210. doi: 10.1021/ct900313w. Epub 2009 Oct 30. J Chem Theory Comput. 2009. PMID: 26602504

10

Simulating the Transition between Gel and Liquid-Crystal Phases of Lipid Bilayers: Dependence of the Transition Temperature on the Hydration Level.

Horta BA, de Vries AH, Hünenberger PH. Horta BA, et al. Among authors: de vries ah. J Chem Theory Comput. 2010 Aug 10;6(8):2488-500. doi: 10.1021/ct100200w. J Chem Theory Comput. 2010. PMID: 26613501

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

113 results

Search Page