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A high-throughput data mining of single nucleotide polymorphisms in Coffea species expressed sequence tags suggests differential homeologous gene expression in the allotetraploid Coffea arabica.
Vidal RO, Mondego JM, Pot D, Ambrósio AB, Andrade AC, Pereira LF, Colombo CA, Vieira LG, Carazzolle MF, Pereira GA. Vidal RO, et al. Among authors: andrade ac. Plant Physiol. 2010 Nov;154(3):1053-66. doi: 10.1104/pp.110.162438. Epub 2010 Sep 23. Plant Physiol. 2010. PMID: 20864545 Free PMC article.
An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora.
Mondego JM, Vidal RO, Carazzolle MF, Tokuda EK, Parizzi LP, Costa GG, Pereira LF, Andrade AC, Colombo CA, Vieira LG, Pereira GA; Brazilian Coffee Genome Project Consortium. Mondego JM, et al. Among authors: andrade ac. BMC Plant Biol. 2011 Feb 8;11:30. doi: 10.1186/1471-2229-11-30. BMC Plant Biol. 2011. PMID: 21303543 Free PMC article.
RBCS1 expression in coffee: Coffea orthologs, Coffea arabica homeologs, and expression variability between genotypes and under drought stress.
Marraccini P, Freire LP, Alves GS, Vieira NG, Vinecky F, Elbelt S, Ramos HJ, Montagnon C, Vieira LG, Leroy T, Pot D, Silva VA, Rodrigues GC, Andrade AC. Marraccini P, et al. Among authors: andrade ac. BMC Plant Biol. 2011 May 16;11:85. doi: 10.1186/1471-2229-11-85. BMC Plant Biol. 2011. PMID: 21575242 Free PMC article.
Differentially expressed genes and proteins upon drought acclimation in tolerant and sensitive genotypes of Coffea canephora.
Marraccini P, Vinecky F, Alves GS, Ramos HJ, Elbelt S, Vieira NG, Carneiro FA, Sujii PS, Alekcevetch JC, Silva VA, DaMatta FM, Ferrão MA, Leroy T, Pot D, Vieira LG, da Silva FR, Andrade AC. Marraccini P, et al. Among authors: andrade ac. J Exp Bot. 2012 Jun;63(11):4191-212. doi: 10.1093/jxb/ers103. Epub 2012 Apr 17. J Exp Bot. 2012. PMID: 22511801 Free PMC article.
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis.
Denoeud F, Carretero-Paulet L, Dereeper A, Droc G, Guyot R, Pietrella M, Zheng C, Alberti A, Anthony F, Aprea G, Aury JM, Bento P, Bernard M, Bocs S, Campa C, Cenci A, Combes MC, Crouzillat D, Da Silva C, Daddiego L, De Bellis F, Dussert S, Garsmeur O, Gayraud T, Guignon V, Jahn K, Jamilloux V, Joët T, Labadie K, Lan T, Leclercq J, Lepelley M, Leroy T, Li LT, Librado P, Lopez L, Muñoz A, Noel B, Pallavicini A, Perrotta G, Poncet V, Pot D, Priyono, Rigoreau M, Rouard M, Rozas J, Tranchant-Dubreuil C, VanBuren R, Zhang Q, Andrade AC, Argout X, Bertrand B, de Kochko A, Graziosi G, Henry RJ, Jayarama, Ming R, Nagai C, Rounsley S, Sankoff D, Giuliano G, Albert VA, Wincker P, Lashermes P. Denoeud F, et al. Among authors: andrade ac. Science. 2014 Sep 5;345(6201):1181-4. doi: 10.1126/science.1255274. Epub 2014 Sep 4. Science. 2014. PMID: 25190796 Free article.
Identification of candidate genes for drought tolerance in coffee by high-throughput sequencing in the shoot apex of different Coffea arabica cultivars.
Mofatto LS, Carneiro Fde A, Vieira NG, Duarte KE, Vidal RO, Alekcevetch JC, Cotta MG, Verdeil JL, Lapeyre-Montes F, Lartaud M, Leroy T, De Bellis F, Pot D, Rodrigues GC, Carazzolle MF, Pereira GA, Andrade AC, Marraccini P. Mofatto LS, et al. Among authors: andrade ac. BMC Plant Biol. 2016 Apr 19;16:94. doi: 10.1186/s12870-016-0777-5. BMC Plant Biol. 2016. PMID: 27095276 Free PMC article.
297 results