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A high-throughput data mining of single nucleotide polymorphisms in Coffea species expressed sequence tags suggests differential homeologous gene expression in the allotetraploid Coffea arabica.
Vidal RO, Mondego JM, Pot D, Ambrósio AB, Andrade AC, Pereira LF, Colombo CA, Vieira LG, Carazzolle MF, Pereira GA. Vidal RO, et al. Among authors: carazzolle mf. Plant Physiol. 2010 Nov;154(3):1053-66. doi: 10.1104/pp.110.162438. Epub 2010 Sep 23. Plant Physiol. 2010. PMID: 20864545 Free PMC article.
Differential gene expression between the biotrophic-like and saprotrophic mycelia of the witches' broom pathogen Moniliophthora perniciosa.
Rincones J, Scarpari LM, Carazzolle MF, Mondego JM, Formighieri EF, Barau JG, Costa GG, Carraro DM, Brentani HP, Vilas-Boas LA, de Oliveira BV, Sabha M, Dias R, Cascardo JM, Azevedo RA, Meinhardt LW, Pereira GA. Rincones J, et al. Among authors: carazzolle mf. Mol Plant Microbe Interact. 2008 Jul;21(7):891-908. doi: 10.1094/MPMI-21-7-0891. Mol Plant Microbe Interact. 2008. PMID: 18533830 Free article.
A genome survey of Moniliophthora perniciosa gives new insights into Witches' Broom Disease of cacao.
Mondego JM, Carazzolle MF, Costa GG, Formighieri EF, Parizzi LP, Rincones J, Cotomacci C, Carraro DM, Cunha AF, Carrer H, Vidal RO, Estrela RC, García O, Thomazella DP, de Oliveira BV, Pires AB, Rio MC, Araújo MR, de Moraes MH, Castro LA, Gramacho KP, Gonçalves MS, Neto JP, Neto AG, Barbosa LV, Guiltinan MJ, Bailey BA, Meinhardt LW, Cascardo JC, Pereira GA. Mondego JM, et al. Among authors: carazzolle mf. BMC Genomics. 2008 Nov 18;9:548. doi: 10.1186/1471-2164-9-548. BMC Genomics. 2008. PMID: 19019209 Free PMC article.
Genes acquired by horizontal transfer are potentially involved in the evolution of phytopathogenicity in Moniliophthora perniciosa and Moniliophthora roreri, two of the major pathogens of cacao.
Tiburcio RA, Costa GG, Carazzolle MF, Mondego JM, Schuster SC, Carlson JE, Guiltinan MJ, Bailey BA, Mieczkowski P, Meinhardt LW, Pereira GA. Tiburcio RA, et al. Among authors: carazzolle mf. J Mol Evol. 2010 Jan;70(1):85-97. doi: 10.1007/s00239-009-9311-9. Epub 2009 Dec 23. J Mol Evol. 2010. PMID: 20033398
An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora.
Mondego JM, Vidal RO, Carazzolle MF, Tokuda EK, Parizzi LP, Costa GG, Pereira LF, Andrade AC, Colombo CA, Vieira LG, Pereira GA; Brazilian Coffee Genome Project Consortium. Mondego JM, et al. Among authors: carazzolle mf. BMC Plant Biol. 2011 Feb 8;11:30. doi: 10.1186/1471-2229-11-30. BMC Plant Biol. 2011. PMID: 21303543 Free PMC article.
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