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The Oxytricha trifallax mitochondrial genome.
Swart EC, Nowacki M, Shum J, Stiles H, Higgins BP, Doak TG, Schotanus K, Magrini VJ, Minx P, Mardis ER, Landweber LF. Swart EC, et al. Among authors: mardis er. Genome Biol Evol. 2012;4(2):136-54. doi: 10.1093/gbe/evr136. Epub 2011 Dec 16. Genome Biol Evol. 2012. PMID: 22179582 Free PMC article.
The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
Stein LD, Bao Z, Blasiar D, Blumenthal T, Brent MR, Chen N, Chinwalla A, Clarke L, Clee C, Coghlan A, Coulson A, D'Eustachio P, Fitch DH, Fulton LA, Fulton RE, Griffiths-Jones S, Harris TW, Hillier LW, Kamath R, Kuwabara PE, Mardis ER, Marra MA, Miner TL, Minx P, Mullikin JC, Plumb RW, Rogers J, Schein JE, Sohrmann M, Spieth J, Stajich JE, Wei C, Willey D, Wilson RK, Durbin R, Waterston RH. Stein LD, et al. Among authors: mardis er. PLoS Biol. 2003 Nov;1(2):E45. doi: 10.1371/journal.pbio.0000045. Epub 2003 Nov 17. PLoS Biol. 2003. PMID: 14624247 Free PMC article.
The repetitive landscape of the chicken genome.
Wicker T, Robertson JS, Schulze SR, Feltus FA, Magrini V, Morrison JA, Mardis ER, Wilson RK, Peterson DG, Paterson AH, Ivarie R. Wicker T, et al. Among authors: mardis er. Genome Res. 2005 Jan;15(1):126-36. doi: 10.1101/gr.2438004. Epub 2004 Jul 15. Genome Res. 2005. PMID: 15256510 Free PMC article.
Application of a superword array in genome assembly.
Huang X, Yang SP, Chinwalla AT, Hillier LW, Minx P, Mardis ER, Wilson RK. Huang X, et al. Among authors: mardis er. Nucleic Acids Res. 2006 Jan 5;34(1):201-5. doi: 10.1093/nar/gkj419. Print 2006. Nucleic Acids Res. 2006. PMID: 16397298 Free PMC article.
Extending assembly of short DNA sequences to handle error.
Jeck WR, Reinhardt JA, Baltrus DA, Hickenbotham MT, Magrini V, Mardis ER, Dangl JL, Jones CD. Jeck WR, et al. Among authors: mardis er. Bioinformatics. 2007 Nov 1;23(21):2942-4. doi: 10.1093/bioinformatics/btm451. Epub 2007 Sep 24. Bioinformatics. 2007. PMID: 17893086
Whole-genome sequencing and variant discovery in C. elegans.
Hillier LW, Marth GT, Quinlan AR, Dooling D, Fewell G, Barnett D, Fox P, Glasscock JI, Hickenbotham M, Huang W, Magrini VJ, Richt RJ, Sander SN, Stewart DA, Stromberg M, Tsung EF, Wylie T, Schedl T, Wilson RK, Mardis ER. Hillier LW, et al. Among authors: mardis er. Nat Methods. 2008 Feb;5(2):183-8. doi: 10.1038/nmeth.1179. Epub 2008 Jan 20. Nat Methods. 2008. PMID: 18204455
Conifers have a unique small RNA silencing signature.
Dolgosheina EV, Morin RD, Aksay G, Sahinalp SC, Magrini V, Mardis ER, Mattsson J, Unrau PJ. Dolgosheina EV, et al. Among authors: mardis er. RNA. 2008 Aug;14(8):1508-15. doi: 10.1261/rna.1052008. Epub 2008 Jun 19. RNA. 2008. PMID: 18566193 Free PMC article.
Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content.
Hughes JF, Skaletsky H, Pyntikova T, Graves TA, van Daalen SK, Minx PJ, Fulton RS, McGrath SD, Locke DP, Friedman C, Trask BJ, Mardis ER, Warren WC, Repping S, Rozen S, Wilson RK, Page DC. Hughes JF, et al. Among authors: mardis er. Nature. 2010 Jan 28;463(7280):536-9. doi: 10.1038/nature08700. Epub 2010 Jan 13. Nature. 2010. PMID: 20072128 Free PMC article.
486 results