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Survey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detection.
Lindsay B, Pop M, Antonio M, Walker AW, Mai V, Ahmed D, Oundo J, Tamboura B, Panchalingam S, Levine MM, Kotloff K, Li S, Magder LS, Paulson JN, Liu B, Ikumapayi U, Ebruke C, Dione M, Adeyemi M, Rance R, Stares MD, Ukhanova M, Barnes B, Lewis I, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, O'Reilly CE, Hannis J, Manalili S, Deleon J, Yasuda I, Blyn L, Ranken R, Li F, Housley R, Ecker DJ, Hossain MA, Breiman RF, Morris JG, McDaniel TK, Parkhill J, Saha D, Sampath R, Stine OC, Nataro JP. Lindsay B, et al. Among authors: parkhill j. J Clin Microbiol. 2013 Oct;51(10):3263-9. doi: 10.1128/JCM.01342-13. Epub 2013 Jul 24. J Clin Microbiol. 2013. PMID: 23884998 Free PMC article.
Single-cell genomics.
Walker A, Parkhill J. Walker A, et al. Among authors: parkhill j. Nat Rev Microbiol. 2008 Mar;6(3):176-7. doi: 10.1038/nrmicro1862. Nat Rev Microbiol. 2008. PMID: 18283727 No abstract available.
High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease.
Walker AW, Sanderson JD, Churcher C, Parkes GC, Hudspith BN, Rayment N, Brostoff J, Parkhill J, Dougan G, Petrovska L. Walker AW, et al. Among authors: parkhill j. BMC Microbiol. 2011 Jan 10;11:7. doi: 10.1186/1471-2180-11-7. BMC Microbiol. 2011. PMID: 21219646 Free PMC article.
Microbiology. Fighting obesity with bacteria.
Walker AW, Parkhill J. Walker AW, et al. Among authors: parkhill j. Science. 2013 Sep 6;341(6150):1069-70. doi: 10.1126/science.1243787. Science. 2013. PMID: 24009379 No abstract available.
Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections.
Cuthbertson L, Rogers GB, Walker AW, Oliver A, Hafiz T, Hoffman LR, Carroll MP, Parkhill J, Bruce KD, van der Gast CJ. Cuthbertson L, et al. Among authors: parkhill j. J Clin Microbiol. 2014 Aug;52(8):3011-6. doi: 10.1128/JCM.00764-14. Epub 2014 Jun 11. J Clin Microbiol. 2014. PMID: 24920767 Free PMC article.
Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.
Pop M, Walker AW, Paulson J, Lindsay B, Antonio M, Hossain MA, Oundo J, Tamboura B, Mai V, Astrovskaya I, Corrada Bravo H, Rance R, Stares M, Levine MM, Panchalingam S, Kotloff K, Ikumapayi UN, Ebruke C, Adeyemi M, Ahmed D, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, Morris JG, Breiman RF, Saha D, Parkhill J, Nataro JP, Stine OC. Pop M, et al. Among authors: parkhill j. Genome Biol. 2014 Jun 27;15(6):R76. doi: 10.1186/gb-2014-15-6-r76. Genome Biol. 2014. PMID: 24995464 Free PMC article.
Microbiota that affect risk for shigellosis in children in low-income countries.
Lindsay B, Oundo J, Hossain MA, Antonio M, Tamboura B, Walker AW, Paulson JN, Parkhill J, Omore R, Faruque AS, Das SK, Ikumapayi UN, Adeyemi M, Sanogo D, Saha D, Sow S, Farag TH, Nasrin D, Li S, Panchalingam S, Levine MM, Kotloff K, Magder LS, Hungerford L, Sommerfelt H, Pop M, Nataro JP, Stine OC. Lindsay B, et al. Among authors: parkhill j. Emerg Infect Dis. 2015 Feb;21(2):242-50. doi: 10.3201/eid2101.140795. Emerg Infect Dis. 2015. PMID: 25625766 Free PMC article.
745 results