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Survey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detection.
Lindsay B, Pop M, Antonio M, Walker AW, Mai V, Ahmed D, Oundo J, Tamboura B, Panchalingam S, Levine MM, Kotloff K, Li S, Magder LS, Paulson JN, Liu B, Ikumapayi U, Ebruke C, Dione M, Adeyemi M, Rance R, Stares MD, Ukhanova M, Barnes B, Lewis I, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, O'Reilly CE, Hannis J, Manalili S, Deleon J, Yasuda I, Blyn L, Ranken R, Li F, Housley R, Ecker DJ, Hossain MA, Breiman RF, Morris JG, McDaniel TK, Parkhill J, Saha D, Sampath R, Stine OC, Nataro JP. Lindsay B, et al. Among authors: paulson jn. J Clin Microbiol. 2013 Oct;51(10):3263-9. doi: 10.1128/JCM.01342-13. Epub 2013 Jul 24. J Clin Microbiol. 2013. PMID: 23884998 Free PMC article.
Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.
Pop M, Walker AW, Paulson J, Lindsay B, Antonio M, Hossain MA, Oundo J, Tamboura B, Mai V, Astrovskaya I, Corrada Bravo H, Rance R, Stares M, Levine MM, Panchalingam S, Kotloff K, Ikumapayi UN, Ebruke C, Adeyemi M, Ahmed D, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, Morris JG, Breiman RF, Saha D, Parkhill J, Nataro JP, Stine OC. Pop M, et al. Genome Biol. 2014 Jun 27;15(6):R76. doi: 10.1186/gb-2014-15-6-r76. Genome Biol. 2014. PMID: 24995464 Free PMC article.
Microbiota that affect risk for shigellosis in children in low-income countries.
Lindsay B, Oundo J, Hossain MA, Antonio M, Tamboura B, Walker AW, Paulson JN, Parkhill J, Omore R, Faruque AS, Das SK, Ikumapayi UN, Adeyemi M, Sanogo D, Saha D, Sow S, Farag TH, Nasrin D, Li S, Panchalingam S, Levine MM, Kotloff K, Magder LS, Hungerford L, Sommerfelt H, Pop M, Nataro JP, Stine OC. Lindsay B, et al. Among authors: paulson jn. Emerg Infect Dis. 2015 Feb;21(2):242-50. doi: 10.3201/eid2101.140795. Emerg Infect Dis. 2015. PMID: 25625766 Free PMC article.
Meta-analysis of the lung microbiota in pulmonary tuberculosis.
Hong BY, Paulson JN, Stine OC, Weinstock GM, Cervantes JL. Hong BY, et al. Among authors: paulson jn. Tuberculosis (Edinb). 2018 Mar;109:102-108. doi: 10.1016/j.tube.2018.02.006. Epub 2018 Feb 22. Tuberculosis (Edinb). 2018. PMID: 29559113
Reply to: "a fair comparison".
Paulson JN, Bravo HC, Pop M. Paulson JN, et al. Nat Methods. 2014 Apr;11(4):359-60. doi: 10.1038/nmeth.2898. Nat Methods. 2014. PMID: 24681718 No abstract available.
Temporal Variations in Cigarette Tobacco Bacterial Community Composition and Tobacco-Specific Nitrosamine Content Are Influenced by Brand and Storage Conditions.
Chopyk J, Chattopadhyay S, Kulkarni P, Smyth EM, Hittle LE, Paulson JN, Pop M, Buehler SS, Clark PI, Mongodin EF, Sapkota AR. Chopyk J, et al. Among authors: paulson jn. Front Microbiol. 2017 Mar 7;8:358. doi: 10.3389/fmicb.2017.00358. eCollection 2017. Front Microbiol. 2017. PMID: 28326071 Free PMC article.
Minimal genetic change in Vibrio cholerae in Mozambique over time: Multilocus variable number tandem repeat analysis and whole genome sequencing.
Garrine M, Mandomando I, Vubil D, Nhampossa T, Acacio S, Li S, Paulson JN, Almeida M, Domman D, Thomson NR, Alonso P, Stine OC. Garrine M, et al. Among authors: paulson jn. PLoS Negl Trop Dis. 2017 Jun 16;11(6):e0005671. doi: 10.1371/journal.pntd.0005671. eCollection 2017 Jun. PLoS Negl Trop Dis. 2017. PMID: 28622368 Free PMC article.
Mentholation affects the cigarette microbiota by selecting for bacteria resistant to harsh environmental conditions and selecting against potential bacterial pathogens.
Chopyk J, Chattopadhyay S, Kulkarni P, Claye E, Babik KR, Reid MC, Smyth EM, Hittle LE, Paulson JN, Cruz-Cano R, Pop M, Buehler SS, Clark PI, Sapkota AR, Mongodin EF. Chopyk J, et al. Among authors: paulson jn. Microbiome. 2017 Feb 15;5(1):22. doi: 10.1186/s40168-017-0235-0. Microbiome. 2017. PMID: 28202080 Free PMC article.
72 results