Shkel IA - Search Results

1

Chemical Interactions of Polyethylene Glycols (PEGs) and Glycerol with Protein Functional Groups: Applications to Effects of PEG and Glycerol on Protein Processes.

Knowles DB, Shkel IA, Phan NM, Sternke M, Lingeman E, Cheng X, Cheng L, O'Connor K, Record MT. Knowles DB, et al. Among authors: shkel ia. Biochemistry. 2015 Jun 9;54(22):3528-42. doi: 10.1021/acs.biochem.5b00246. Epub 2015 May 22. Biochemistry. 2015. PMID: 25962980 Free PMC article.

2

Analytic binding isotherms describing competitive interactions of a protein ligand with specific and nonspecific sites on the same DNA oligomer.

Tsodikov OV, Holbrook JA, Shkel IA, Record MT Jr. Tsodikov OV, et al. Among authors: shkel ia. Biophys J. 2001 Oct;81(4):1960-9. doi: 10.1016/S0006-3495(01)75847-X. Biophys J. 2001. PMID: 11566770 Free PMC article.

3

Asymptotic solution of the cylindrical nonlinear Poisson-Boltzmann equation at low salt concentration: analytic expressions for surface potential and preferential interaction coefficient.

Shkel IA, Tsodikov OV, Record MT Jr. Shkel IA, et al. Proc Natl Acad Sci U S A. 2002 Mar 5;99(5):2597-602. doi: 10.1073/pnas.032480699. Proc Natl Acad Sci U S A. 2002. PMID: 11880615 Free PMC article.

4

Effect of the number of nucleic acid oligomer charges on the salt dependence of stability (DeltaG 37degrees) and melting temperature (Tm): NLPB analysis of experimental data.

Shkel IA, Record MT Jr. Shkel IA, et al. Biochemistry. 2004 Jun 8;43(22):7090-101. doi: 10.1021/bi036225e. Biochemistry. 2004. PMID: 15170346

5

Interactions of the KWK6 cationic peptide with short nucleic acid oligomers: demonstration of large Coulombic end effects on binding at 0.1-0.2 M salt.

Ballin JD, Shkel IA, Record MT Jr. Ballin JD, et al. Among authors: shkel ia. Nucleic Acids Res. 2004 Jun 17;32(11):3271-81. doi: 10.1093/nar/gkh646. Print 2004. Nucleic Acids Res. 2004. PMID: 15205469 Free PMC article.

6

Interactions of cationic ligands and proteins with small nucleic acids: analytic treatment of the large coulombic end effect on binding free energy as a function of salt concentration.

Shkel IA, Ballin JD, Record MT Jr. Shkel IA, et al. Biochemistry. 2006 Jul 11;45(27):8411-26. doi: 10.1021/bi0520434. Biochemistry. 2006. PMID: 16819840

7

Crowding and confinement effects on protein diffusion in vivo.

Konopka MC, Shkel IA, Cayley S, Record MT, Weisshaar JC. Konopka MC, et al. Among authors: shkel ia. J Bacteriol. 2006 Sep;188(17):6115-23. doi: 10.1128/JB.01982-05. J Bacteriol. 2006. PMID: 16923878 Free PMC article.

8

Cytoplasmic protein mobility in osmotically stressed Escherichia coli.

Konopka MC, Sochacki KA, Bratton BP, Shkel IA, Record MT, Weisshaar JC. Konopka MC, et al. Among authors: shkel ia. J Bacteriol. 2009 Jan;191(1):231-7. doi: 10.1128/JB.00536-08. Epub 2008 Oct 24. J Bacteriol. 2009. PMID: 18952804 Free PMC article.

9

Why Hofmeister effects of many salts favor protein folding but not DNA helix formation.

Pegram LM, Wendorff T, Erdmann R, Shkel I, Bellissimo D, Felitsky DJ, Record MT Jr. Pegram LM, et al. Proc Natl Acad Sci U S A. 2010 Apr 27;107(17):7716-21. doi: 10.1073/pnas.0913376107. Epub 2010 Apr 12. Proc Natl Acad Sci U S A. 2010. PMID: 20385834 Free PMC article.

10

Protein diffusion in the periplasm of E. coli under osmotic stress.

Sochacki KA, Shkel IA, Record MT, Weisshaar JC. Sochacki KA, et al. Among authors: shkel ia. Biophys J. 2011 Jan 5;100(1):22-31. doi: 10.1016/j.bpj.2010.11.044. Biophys J. 2011. PMID: 21190653 Free PMC article.

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