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Partial sequencing reveals the transposable element composition of Coffea genomes and provides evidence for distinct evolutionary stories.
Guyot R, Darré T, Dupeyron M, de Kochko A, Hamon S, Couturon E, Crouzillat D, Rigoreau M, Rakotomalala JJ, Raharimalala NE, Akaffou SD, Hamon P. Guyot R, et al. Among authors: hamon p, hamon s. Mol Genet Genomics. 2016 Oct;291(5):1979-90. doi: 10.1007/s00438-016-1235-7. Epub 2016 Jul 28. Mol Genet Genomics. 2016. PMID: 27469896
Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae).
Hamon P, Duroy PO, Dubreuil-Tranchant C, Mafra D'Almeida Costa P, Duret C, Razafinarivo NJ, Couturon E, Hamon S, de Kochko A, Poncet V, Guyot R. Hamon P, et al. Among authors: hamon s. Mol Genet Genomics. 2011 Jun;285(6):447-60. doi: 10.1007/s00438-011-0617-0. Epub 2011 Apr 20. Mol Genet Genomics. 2011. PMID: 21505885
Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites.
Razafinarivo NJ, Guyot R, Davis AP, Couturon E, Hamon S, Crouzillat D, Rigoreau M, Dubreuil-Tranchant C, Poncet V, De Kochko A, Rakotomalala JJ, Hamon P. Razafinarivo NJ, et al. Among authors: hamon p, hamon s. Ann Bot. 2013 Feb;111(2):229-48. doi: 10.1093/aob/mcs283. Epub 2012 Dec 28. Ann Bot. 2013. PMID: 23275631 Free PMC article.
Genotyping-by-sequencing provides the first well-resolved phylogeny for coffee (Coffea) and insights into the evolution of caffeine content in its species: GBS coffee phylogeny and the evolution of caffeine content.
Hamon P, Grover CE, Davis AP, Rakotomalala JJ, Raharimalala NE, Albert VA, Sreenath HL, Stoffelen P, Mitchell SE, Couturon E, Hamon S, de Kochko A, Crouzillat D, Rigoreau M, Sumirat U, Akaffou S, Guyot R. Hamon P, et al. Among authors: hamon s. Mol Phylogenet Evol. 2017 Apr;109:351-361. doi: 10.1016/j.ympev.2017.02.009. Epub 2017 Feb 16. Mol Phylogenet Evol. 2017. PMID: 28212875
Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes.
Guyot R, de la Mare M, Viader V, Hamon P, Coriton O, Bustamante-Porras J, Poncet V, Campa C, Hamon S, de Kochko A. Guyot R, et al. Among authors: hamon p, hamon s. BMC Plant Biol. 2009 Feb 25;9:22. doi: 10.1186/1471-2229-9-22. BMC Plant Biol. 2009. PMID: 19243618 Free PMC article.
149 results