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Genotyping-by-sequencing provides the first well-resolved phylogeny for coffee (Coffea) and insights into the evolution of caffeine content in its species: GBS coffee phylogeny and the evolution of caffeine content.
Mol Phylogenet Evol. 2017 Apr;109:351-361. doi: 10.1016/j.ympev.2017.02.009. Epub 2017 Feb 16.
Mol Phylogenet Evol. 2017.
PMID: 28212875
WCSdb: a database of wild Coffea species.
Guyot R, Hamon P, Couturon E, Raharimalala N, Rakotomalala JJ, Lakkanna S, Sabatier S, Affouard A, Bonnet P.
Guyot R, et al.
Database (Oxford). 2020 Nov 20;2020:baaa069. doi: 10.1093/database/baaa069.
Database (Oxford). 2020.
PMID: 33216899
Free PMC article.
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Partial sequencing reveals the transposable element composition of Coffea genomes and provides evidence for distinct evolutionary stories.
Guyot R, Darré T, Dupeyron M, de Kochko A, Hamon S, Couturon E, Crouzillat D, Rigoreau M, Rakotomalala JJ, Raharimalala NE, Akaffou SD, Hamon P.
Guyot R, et al. Among authors: raharimalala ne.
Mol Genet Genomics. 2016 Oct;291(5):1979-90. doi: 10.1007/s00438-016-1235-7. Epub 2016 Jul 28.
Mol Genet Genomics. 2016.
PMID: 27469896
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Phenotypic diversity assessment within a major ex situ collection of wild endemic coffees in Madagascar.
Rimlinger A, Raharimalala N, Letort V, Rakotomalala JJ, Crouzillat D, Guyot R, Hamon P, Sabatier S.
Rimlinger A, et al.
Ann Bot. 2020 Oct 6;126(5):849-863. doi: 10.1093/aob/mcaa073.
Ann Bot. 2020.
PMID: 32303759
Free PMC article.
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The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago.
Raharimalala N, Rombauts S, McCarthy A, Garavito A, Orozco-Arias S, Bellanger L, Morales-Correa AY, Froger S, Michaux S, Berry V, Metairon S, Fournier C, Lepelley M, Mueller L, Couturon E, Hamon P, Rakotomalala JJ, Descombes P, Guyot R, Crouzillat D.
Raharimalala N, et al.
Sci Rep. 2021 Apr 14;11(1):8119. doi: 10.1038/s41598-021-87419-0.
Sci Rep. 2021.
PMID: 33854089
Free PMC article.
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