Reiter L - Search Results

1

Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses.

Rosenberger G, Bludau I, Schmitt U, Heusel M, Hunter CL, Liu Y, MacCoss MJ, MacLean BX, Nesvizhskii AI, Pedrioli PGA, Reiter L, Röst HL, Tate S, Ting YS, Collins BC, Aebersold R. Rosenberger G, et al. Among authors: reiter l. Nat Methods. 2017 Sep;14(9):921-927. doi: 10.1038/nmeth.4398. Epub 2017 Aug 21. Nat Methods. 2017. PMID: 28825704 Free PMC article.

2

Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry.

Reiter L, Claassen M, Schrimpf SP, Jovanovic M, Schmidt A, Buhmann JM, Hengartner MO, Aebersold R. Reiter L, et al. Mol Cell Proteomics. 2009 Nov;8(11):2405-17. doi: 10.1074/mcp.M900317-MCP200. Epub 2009 Jul 16. Mol Cell Proteomics. 2009. PMID: 19608599 Free PMC article.

3

A quantitative targeted proteomics approach to validate predicted microRNA targets in C. elegans.

Jovanovic M, Reiter L, Picotti P, Lange V, Bogan E, Hurschler BA, Blenkiron C, Lehrbach NJ, Ding XC, Weiss M, Schrimpf SP, Miska EA, Grosshans H, Aebersold R, Hengartner MO. Jovanovic M, et al. Among authors: reiter l. Nat Methods. 2010 Oct;7(10):837-42. doi: 10.1038/nmeth.1504. Epub 2010 Sep 12. Nat Methods. 2010. PMID: 20835247 Free PMC article.

4

Comprehensive quantitative analysis of central carbon and amino-acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics.

Costenoble R, Picotti P, Reiter L, Stallmach R, Heinemann M, Sauer U, Aebersold R. Costenoble R, et al. Among authors: reiter l. Mol Syst Biol. 2011 Feb 1;7:464. doi: 10.1038/msb.2010.122. Mol Syst Biol. 2011. PMID: 21283140 Free PMC article.

5

ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry.

Brusniak MY, Kwok ST, Christiansen M, Campbell D, Reiter L, Picotti P, Kusebauch U, Ramos H, Deutsch EW, Chen J, Moritz RL, Aebersold R. Brusniak MY, et al. Among authors: reiter l. BMC Bioinformatics. 2011 Mar 18;12:78. doi: 10.1186/1471-2105-12-78. BMC Bioinformatics. 2011. PMID: 21414234 Free PMC article.

6

mProphet: automated data processing and statistical validation for large-scale SRM experiments.

Reiter L, Rinner O, Picotti P, Hüttenhain R, Beck M, Brusniak MY, Hengartner MO, Aebersold R. Reiter L, et al. Nat Methods. 2011 May;8(5):430-5. doi: 10.1038/nmeth.1584. Epub 2011 Mar 20. Nat Methods. 2011. PMID: 21423193

7

Biomarker validation in blood specimens by selected reaction monitoring mass spectrometry of N-glycosites.

Ossola R, Schiess R, Picotti P, Rinner O, Reiter L, Aebersold R. Ossola R, et al. Among authors: reiter l. Methods Mol Biol. 2011;728:179-94. doi: 10.1007/978-1-61779-068-3_11. Methods Mol Biol. 2011. PMID: 21468948

8

IPM: An integrated protein model for false discovery rate estimation and identification in high-throughput proteomics.

Higdon R, Reiter L, Hather G, Haynes W, Kolker N, Stewart E, Bauman AT, Picotti P, Schmidt A, van Belle G, Aebersold R, Kolker E. Higdon R, et al. Among authors: reiter l. J Proteomics. 2011 Dec 10;75(1):116-21. doi: 10.1016/j.jprot.2011.06.003. Epub 2011 Jun 21. J Proteomics. 2011. PMID: 21718813

9

Generic comparison of protein inference engines.

Claassen M, Reiter L, Hengartner MO, Buhmann JM, Aebersold R. Claassen M, et al. Among authors: reiter l. Mol Cell Proteomics. 2012 Apr;11(4):O110.007088. doi: 10.1074/mcp.O110.007088. Epub 2011 Nov 4. Mol Cell Proteomics. 2012. PMID: 22057310 Free PMC article.

10

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis.

Gillet LC, Navarro P, Tate S, Röst H, Selevsek N, Reiter L, Bonner R, Aebersold R. Gillet LC, et al. Among authors: reiter l. Mol Cell Proteomics. 2012 Jun;11(6):O111.016717. doi: 10.1074/mcp.O111.016717. Epub 2012 Jan 18. Mol Cell Proteomics. 2012. PMID: 22261725 Free PMC article.

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