von Haeseler A - Search Results

1

Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets.

Neumann T, Herzog VA, Muhar M, von Haeseler A, Zuber J, Ameres SL, Rescheneder P. Neumann T, et al. Among authors: von haeseler a. BMC Bioinformatics. 2019 May 20;20(1):258. doi: 10.1186/s12859-019-2849-7. BMC Bioinformatics. 2019. PMID: 31109287 Free PMC article.

2

FACT: functional annotation transfer between proteins with similar feature architectures.

Koestler T, von Haeseler A, Ebersberger I. Koestler T, et al. Among authors: von haeseler a. BMC Bioinformatics. 2010 Aug 9;11:417. doi: 10.1186/1471-2105-11-417. BMC Bioinformatics. 2010. PMID: 20696036 Free PMC article.

3

Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis.

Dinh HQ, Dubin M, Sedlazeck FJ, Lettner N, Mittelsten Scheid O, von Haeseler A. Dinh HQ, et al. Among authors: von haeseler a. PLoS One. 2012;7(7):e41528. doi: 10.1371/journal.pone.0041528. Epub 2012 Jul 20. PLoS One. 2012. PMID: 22911809 Free PMC article.

4

NGC: lossless and lossy compression of aligned high-throughput sequencing data.

Popitsch N, von Haeseler A. Popitsch N, et al. Among authors: von haeseler a. Nucleic Acids Res. 2013 Jan 7;41(1):e27. doi: 10.1093/nar/gks939. Epub 2012 Oct 12. Nucleic Acids Res. 2013. PMID: 23066097 Free PMC article.

5

Benefit-of-doubt (BOD) scoring: a sequencing-based method for SNP candidate assessment from high to medium read number data sets.

Sedlazeck FJ, Talloji P, von Haeseler A, Bachmair A. Sedlazeck FJ, et al. Among authors: von haeseler a. Genomics. 2013 Mar;101(3):204-9. doi: 10.1016/j.ygeno.2012.12.001. Epub 2012 Dec 12. Genomics. 2013. PMID: 23246509 Free PMC article.

6

NextGenMap: fast and accurate read mapping in highly polymorphic genomes.

Sedlazeck FJ, Rescheneder P, von Haeseler A. Sedlazeck FJ, et al. Among authors: von haeseler a. Bioinformatics. 2013 Nov 1;29(21):2790-1. doi: 10.1093/bioinformatics/btt468. Epub 2013 Aug 23. Bioinformatics. 2013. PMID: 23975764

7

Teaser: Individualized benchmarking and optimization of read mapping results for NGS data.

Smolka M, Rescheneder P, Schatz MC, von Haeseler A, Sedlazeck FJ. Smolka M, et al. Among authors: von haeseler a. Genome Biol. 2015 Oct 22;16:235. doi: 10.1186/s13059-015-0803-1. Genome Biol. 2015. PMID: 26494581 Free PMC article.

8

A-type lamins bind both hetero- and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha.

Gesson K, Rescheneder P, Skoruppa MP, von Haeseler A, Dechat T, Foisner R. Gesson K, et al. Among authors: von haeseler a. Genome Res. 2016 Apr;26(4):462-73. doi: 10.1101/gr.196220.115. Epub 2016 Jan 21. Genome Res. 2016. PMID: 26798136 Free PMC article.

9

The genomic basis of circadian and circalunar timing adaptations in a midge.

Kaiser TS, Poehn B, Szkiba D, Preussner M, Sedlazeck FJ, Zrim A, Neumann T, Nguyen LT, Betancourt AJ, Hummel T, Vogel H, Dorner S, Heyd F, von Haeseler A, Tessmar-Raible K. Kaiser TS, et al. Among authors: von haeseler a. Nature. 2016 Dec 1;540(7631):69-73. doi: 10.1038/nature20151. Epub 2016 Nov 21. Nature. 2016. PMID: 27871090 Free PMC article.

10

Thiol-linked alkylation of RNA to assess expression dynamics.

Herzog VA, Reichholf B, Neumann T, Rescheneder P, Bhat P, Burkard TR, Wlotzka W, von Haeseler A, Zuber J, Ameres SL. Herzog VA, et al. Among authors: von haeseler a. Nat Methods. 2017 Dec;14(12):1198-1204. doi: 10.1038/nmeth.4435. Epub 2017 Sep 25. Nat Methods. 2017. PMID: 28945705 Free PMC article.

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