Aebersold R - Search Results

1

The GTPase Nog1 co-ordinates the assembly, maturation and quality control of distant ribosomal functional centers.

Klingauf-Nerurkar P, Gillet LC, Portugal-Calisto D, Oborská-Oplová M, Jäger M, Schubert OT, Pisano A, Peña C, Rao S, Altvater M, Chang Y, Aebersold R, Panse VG. Klingauf-Nerurkar P, et al. Among authors: aebersold r. Elife. 2020 Jan 7;9:e52474. doi: 10.7554/eLife.52474. Elife. 2020. PMID: 31909713 Free PMC article.

2

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis.

Gillet LC, Navarro P, Tate S, Röst H, Selevsek N, Reiter L, Bonner R, Aebersold R. Gillet LC, et al. Among authors: aebersold r. Mol Cell Proteomics. 2012 Jun;11(6):O111.016717. doi: 10.1074/mcp.O111.016717. Epub 2012 Jan 18. Mol Cell Proteomics. 2012. PMID: 22261725 Free PMC article.

3

Quantitative measurements of N-linked glycoproteins in human plasma by SWATH-MS.

Liu Y, Hüttenhain R, Surinova S, Gillet LC, Mouritsen J, Brunner R, Navarro P, Aebersold R. Liu Y, et al. Among authors: aebersold r. Proteomics. 2013 Apr;13(8):1247-56. doi: 10.1002/pmic.201200417. Epub 2013 Mar 11. Proteomics. 2013. PMID: 23322582

4

The Mtb proteome library: a resource of assays to quantify the complete proteome of Mycobacterium tuberculosis.

Schubert OT, Mouritsen J, Ludwig C, Röst HL, Rosenberger G, Arthur PK, Claassen M, Campbell DS, Sun Z, Farrah T, Gengenbacher M, Maiolica A, Kaufmann SHE, Moritz RL, Aebersold R. Schubert OT, et al. Among authors: aebersold r. Cell Host Microbe. 2013 May 15;13(5):602-612. doi: 10.1016/j.chom.2013.04.008. Cell Host Microbe. 2013. PMID: 23684311 Free PMC article.

5

Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system.

Collins BC, Gillet LC, Rosenberger G, Röst HL, Vichalkovski A, Gstaiger M, Aebersold R. Collins BC, et al. Among authors: aebersold r. Nat Methods. 2013 Dec;10(12):1246-53. doi: 10.1038/nmeth.2703. Epub 2013 Oct 27. Nat Methods. 2013. PMID: 24162925

6

Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis.

Cortes T, Schubert OT, Rose G, Arnvig KB, Comas I, Aebersold R, Young DB. Cortes T, et al. Among authors: aebersold r. Cell Rep. 2013 Nov 27;5(4):1121-31. doi: 10.1016/j.celrep.2013.10.031. Epub 2013 Nov 21. Cell Rep. 2013. PMID: 24268774 Free PMC article.

7

Conserved peptide fragmentation as a benchmarking tool for mass spectrometers and a discriminating feature for targeted proteomics.

Toprak UH, Gillet LC, Maiolica A, Navarro P, Leitner A, Aebersold R. Toprak UH, et al. Among authors: aebersold r. Mol Cell Proteomics. 2014 Aug;13(8):2056-71. doi: 10.1074/mcp.O113.036475. Epub 2014 Mar 12. Mol Cell Proteomics. 2014. PMID: 24623587 Free PMC article.

8

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data.

Röst HL, Rosenberger G, Navarro P, Gillet L, Miladinović SM, Schubert OT, Wolski W, Collins BC, Malmström J, Malmström L, Aebersold R. Röst HL, et al. Among authors: aebersold r. Nat Biotechnol. 2014 Mar;32(3):219-23. doi: 10.1038/nbt.2841. Nat Biotechnol. 2014. PMID: 24727770 No abstract available.

9

Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness.

Liu Y, Chen J, Sethi A, Li QK, Chen L, Collins B, Gillet LC, Wollscheid B, Zhang H, Aebersold R. Liu Y, et al. Among authors: aebersold r. Mol Cell Proteomics. 2014 Jul;13(7):1753-68. doi: 10.1074/mcp.M114.038273. Epub 2014 Apr 16. Mol Cell Proteomics. 2014. PMID: 24741114 Free PMC article.

10

Phosphoproteomic analyses reveal novel cross-modulation mechanisms between two signaling pathways in yeast.

Vaga S, Bernardo-Faura M, Cokelaer T, Maiolica A, Barnes CA, Gillet LC, Hegemann B, van Drogen F, Sharifian H, Klipp E, Peter M, Saez-Rodriguez J, Aebersold R. Vaga S, et al. Among authors: aebersold r. Mol Syst Biol. 2014 Dec 9;10(12):767. doi: 10.15252/msb.20145112. Mol Syst Biol. 2014. PMID: 25492886 Free PMC article.

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