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Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.
Nat Med. 2021 Mar;27(3):546-559. doi: 10.1038/s41591-020-01227-z. Epub 2021 Mar 2.
Nat Med. 2021.
PMID: 33654293
Free PMC article.
SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues.
Ziegler CGK, Allon SJ, Nyquist SK, Mbano IM, Miao VN, Tzouanas CN, Cao Y, Yousif AS, Bals J, Hauser BM, Feldman J, Muus C, Wadsworth MH 2nd, Kazer SW, Hughes TK, Doran B, Gatter GJ, Vukovic M, Taliaferro F, Mead BE, Guo Z, Wang JP, Gras D, Plaisant M, Ansari M, Angelidis I, Adler H, Sucre JMS, Taylor CJ, Lin B, Waghray A, Mitsialis V, Dwyer DF, Buchheit KM, Boyce JA, Barrett NA, Laidlaw TM, Carroll SL, Colonna L, Tkachev V, Peterson CW, Yu A, Zheng HB, Gideon HP, Winchell CG, Lin PL, Bingle CD, Snapper SB, Kropski JA, Theis FJ, Schiller HB, Zaragosi LE, Barbry P, Leslie A, Kiem HP, Flynn JL, Fortune SM, Berger B, Finberg RW, Kean LS, Garber M, Schmidt AG, Lingwood D, Shalek AK, Ordovas-Montanes J; HCA Lung Biological Network. Electronic address: lung-network@humancellatlas.org; HCA Lung Biological Network.
Ziegler CGK, et al. Among authors: allon sj.
Cell. 2020 May 28;181(5):1016-1035.e19. doi: 10.1016/j.cell.2020.04.035. Epub 2020 Apr 27.
Cell. 2020.
PMID: 32413319
Free PMC article.
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Human airway mast cells proliferate and acquire distinct inflammation-driven phenotypes during type 2 inflammation.
Dwyer DF, Ordovas-Montanes J, Allon SJ, Buchheit KM, Vukovic M, Derakhshan T, Feng C, Lai J, Hughes TK, Nyquist SK, Giannetti MP, Berger B, Bhattacharyya N, Roditi RE, Katz HR, Nawijn MC, Berg M, van den Berge M, Laidlaw TM, Shalek AK, Barrett NA, Boyce JA.
Dwyer DF, et al. Among authors: allon sj.
Sci Immunol. 2021 Feb 26;6(56):eabb7221. doi: 10.1126/sciimmunol.abb7221.
Sci Immunol. 2021.
PMID: 33637594
Free PMC article.
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Loss of DNA methyltransferase activity in primed human ES cells triggers increased cell-cell variability and transcriptional repression.
Tsankov AM, Wadsworth MH 2nd, Akopian V, Charlton J, Allon SJ, Arczewska A, Mead BE, Drake RS, Smith ZD, Mikkelsen TS, Shalek AK, Meissner A.
Tsankov AM, et al. Among authors: allon sj.
Development. 2019 Sep 12;146(19):dev174722. doi: 10.1242/dev.174722.
Development. 2019.
PMID: 31515224
Free PMC article.
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Cyclin D3 drives inertial cell cycling in dark zone germinal center B cells.
Pae J, Ersching J, Castro TBR, Schips M, Mesin L, Allon SJ, Ordovas-Montanes J, Mlynarczyk C, Melnick A, Efeyan A, Shalek AK, Meyer-Hermann M, Victora GD.
Pae J, et al. Among authors: allon sj.
J Exp Med. 2021 Apr 5;218(4):e20201699. doi: 10.1084/jem.20201699.
J Exp Med. 2021.
PMID: 33332554
Free PMC article.
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Expression of Foxp3 by T follicular helper cells in end-stage germinal centers.
Jacobsen JT, Hu W, R Castro TB, Solem S, Galante A, Lin Z, Allon SJ, Mesin L, Bilate AM, Schiepers A, Shalek AK, Rudensky AY, Victora GD.
Jacobsen JT, et al. Among authors: allon sj.
Science. 2021 Jul 16;373(6552):eabe5146. doi: 10.1126/science.abe5146. Epub 2021 Jul 15.
Science. 2021.
PMID: 34437125
Free PMC article.
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Global analysis of physical and functional RNA targets of hnRNP L reveals distinct sequence and epigenetic features of repressed and enhanced exons.
Cole BS, Tapescu I, Allon SJ, Mallory MJ, Qiu J, Lake RJ, Fan HY, Fu XD, Lynch KW.
Cole BS, et al. Among authors: allon sj.
RNA. 2015 Dec;21(12):2053-66. doi: 10.1261/rna.052969.115. Epub 2015 Oct 5.
RNA. 2015.
PMID: 26437669
Free PMC article.
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Induced transcription and stability of CELF2 mRNA drives widespread alternative splicing during T-cell signaling.
Mallory MJ, Allon SJ, Qiu J, Gazzara MR, Tapescu I, Martinez NM, Fu XD, Lynch KW.
Mallory MJ, et al. Among authors: allon sj.
Proc Natl Acad Sci U S A. 2015 Apr 28;112(17):E2139-48. doi: 10.1073/pnas.1423695112. Epub 2015 Apr 13.
Proc Natl Acad Sci U S A. 2015.
PMID: 25870297
Free PMC article.
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