Sykacek P - Search Results

1

PCprophet: a framework for protein complex prediction and differential analysis using proteomic data.

Fossati A, Li C, Uliana F, Wendt F, Frommelt F, Sykacek P, Heusel M, Hallal M, Bludau I, Capraz T, Xue P, Song J, Wollscheid B, Purcell AW, Gstaiger M, Aebersold R. Fossati A, et al. Among authors: sykacek p. Nat Methods. 2021 May;18(5):520-527. doi: 10.1038/s41592-021-01107-5. Epub 2021 Apr 15. Nat Methods. 2021. PMID: 33859439

2

Detecting and correcting systematic variation in large-scale RNA sequencing data.

Li S, Łabaj PP, Zumbo P, Sykacek P, Shi W, Shi L, Phan J, Wu PY, Wang M, Wang C, Thierry-Mieg D, Thierry-Mieg J, Kreil DP, Mason CE. Li S, et al. Among authors: sykacek p. Nat Biotechnol. 2014 Sep;32(9):888-95. doi: 10.1038/nbt.3000. Epub 2014 Aug 24. Nat Biotechnol. 2014. PMID: 25150837 Free PMC article.

3

Biological assessment of robust noise models in microarray data analysis.

Posekany A, Felsenstein K, Sykacek P. Posekany A, et al. Among authors: sykacek p. Bioinformatics. 2011 Mar 15;27(6):807-14. doi: 10.1093/bioinformatics/btr018. Epub 2011 Jan 19. Bioinformatics. 2011. PMID: 21252077 Free PMC article.

4

A dual role for autophagy in a murine model of lung cancer.

Rao S, Tortola L, Perlot T, Wirnsberger G, Novatchkova M, Nitsch R, Sykacek P, Frank L, Schramek D, Komnenovic V, Sigl V, Aumayr K, Schmauss G, Fellner N, Handschuh S, Glösmann M, Pasierbek P, Schlederer M, Resch GP, Ma Y, Yang H, Popper H, Kenner L, Kroemer G, Penninger JM. Rao S, et al. Among authors: sykacek p. Nat Commun. 2014;5:3056. doi: 10.1038/ncomms4056. Nat Commun. 2014. PMID: 24445999 Free article.

5

Identifying geographically differentiated features of Ethopian Nile tilapia (Oreochromis niloticus) morphology with machine learning.

Wöber W, Curto M, Tibihika P, Meulenbroek P, Alemayehu E, Mehnen L, Meimberg H, Sykacek P. Wöber W, et al. Among authors: sykacek p. PLoS One. 2021 Apr 15;16(4):e0249593. doi: 10.1371/journal.pone.0249593. eCollection 2021. PLoS One. 2021. PMID: 33857176 Free PMC article.

6

RNA interference in ageing research--a mini-review.

Minois N, Sykacek P, Godsey B, Kreil DP. Minois N, et al. Among authors: sykacek p. Gerontology. 2010;56(5):496-506. doi: 10.1159/000277626. Epub 2010 Jan 20. Gerontology. 2010. PMID: 20090308 Free article. Review.

7

An analysis of single amino acid repeats as use case for application specific background models.

Łabaj PP, Sykacek P, Kreil DP. Łabaj PP, et al. Among authors: sykacek p. BMC Bioinformatics. 2011 May 19;12:173. doi: 10.1186/1471-2105-12-173. BMC Bioinformatics. 2011. PMID: 21595908 Free PMC article.

8

Bacterial protein signals are associated with Crohn's disease.

Juste C, Kreil DP, Beauvallet C, Guillot A, Vaca S, Carapito C, Mondot S, Sykacek P, Sokol H, Blon F, Lepercq P, Levenez F, Valot B, Carré W, Loux V, Pons N, David O, Schaeffer B, Lepage P, Martin P, Monnet V, Seksik P, Beaugerie L, Ehrlich SD, Gibrat JF, Van Dorsselaer A, Doré J. Juste C, et al. Among authors: sykacek p. Gut. 2014 Oct;63(10):1566-77. doi: 10.1136/gutjnl-2012-303786. Epub 2014 Jan 16. Gut. 2014. PMID: 24436141 Free PMC article.

9

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.

SEQC/MAQC-III Consortium. SEQC/MAQC-III Consortium. Nat Biotechnol. 2014 Sep;32(9):903-14. doi: 10.1038/nbt.2957. Epub 2014 Aug 24. Nat Biotechnol. 2014. PMID: 25150838 Free PMC article.

10

A friendly statistics package for microarray analysis.

Sykacek P, Furlong RA, Micklem G. Sykacek P, et al. Bioinformatics. 2005 Nov 1;21(21):4069-70. doi: 10.1093/bioinformatics/bti663. Epub 2005 Sep 27. Bioinformatics. 2005. PMID: 16188932

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