Osborne JD - Search Results

1

AllergyMap: An Open Source Corpus of Allergy Mention Normalizations.

Wang AY, Osborne JD, Danila MI, Naidech AM, Liebovitz DM. Wang AY, et al. Among authors: osborne jd. AMIA Annu Symp Proc. 2021 Jan 25;2020:1249-1257. eCollection 2020. AMIA Annu Symp Proc. 2021. PMID: 33936501 Free PMC article.

2

Identification of Gout Flares in Chief Complaint Text Using Natural Language Processing.

Osborne JD, Booth JS, O'Leary T, Mudano A, Rosas G, Foster PJ, Saag KG, Danila MI. Osborne JD, et al. AMIA Annu Symp Proc. 2021 Jan 25;2020:973-982. eCollection 2020. AMIA Annu Symp Proc. 2021. PMID: 33936473 Free PMC article.

3

CUILESS2016: a clinical corpus applying compositional normalization of text mentions.

Osborne JD, Neu MB, Danila MI, Solorio T, Bethard SJ. Osborne JD, et al. J Biomed Semantics. 2018 Jan 10;9(1):2. doi: 10.1186/s13326-017-0173-6. J Biomed Semantics. 2018. PMID: 29316970 Free PMC article.

4

Annotating the human genome with Disease Ontology.

Osborne JD, Flatow J, Holko M, Lin SM, Kibbe WA, Zhu LJ, Danila MI, Feng G, Chisholm RL. Osborne JD, et al. BMC Genomics. 2009 Jul 7;10 Suppl 1(Suppl 1):S6. doi: 10.1186/1471-2164-10-S1-S6. BMC Genomics. 2009. PMID: 19594883 Free PMC article.

5

Phenotype Detection Registry System (PheDRS) - Implementation of a Generalizable Single Institution Clinical Registry Architecture.

Osborne JD, Khare A, Dempsey DM, Wells JM, Wyatt M, Gordon G, Liang WH, Cimino J. Osborne JD, et al. AMIA Annu Symp Proc. 2018 Dec 5;2018:847-856. eCollection 2018. AMIA Annu Symp Proc. 2018. PMID: 30815127 Free PMC article.

6

Efficient identification of nationally mandated reportable cancer cases using natural language processing and machine learning.

Osborne JD, Wyatt M, Westfall AO, Willig J, Bethard S, Gordon G. Osborne JD, et al. J Am Med Inform Assoc. 2016 Nov;23(6):1077-1084. doi: 10.1093/jamia/ocw006. Epub 2016 Mar 28. J Am Med Inform Assoc. 2016. PMID: 27026618 Free PMC article.

7

Mining biomedical data using MetaMap Transfer (MMtx) and the Unified Medical Language System (UMLS).

Osborne JD, Lin S, Zhu L, Kibbe WA. Osborne JD, et al. Methods Mol Biol. 2007;408:153-69. doi: 10.1007/978-1-59745-547-3_9. Methods Mol Biol. 2007. PMID: 18314582

8

Interpreting microarray results with gene ontology and MeSH.

Osborne JD, Zhu LJ, Lin SM, Kibbe WA. Osborne JD, et al. Methods Mol Biol. 2007;377:223-42. doi: 10.1007/978-1-59745-390-5_14. Methods Mol Biol. 2007. PMID: 17634620 Review.

9

Annotation of Opioid Use Disorder Entity Modifiers in Clinical Text.

Almudaifer AI, Feldman SS, O'Leary T, Covington WL, Hairston J, Deitch Z, Crisan E, Riggs K, Walters L, Osborne JD. Almudaifer AI, et al. Among authors: osborne jd. Stud Health Technol Inform. 2024 Jan 25;310:1458-1459. doi: 10.3233/SHTI231243. Stud Health Technol Inform. 2024. PMID: 38269695

10

Semantically oriented EHR navigation with a patient specific knowledge base and a clinical context ontology.

Colicchio TK, Osborne JD, Do Rosario CV, Anand A, Timkovich NA, Wyatt MC, Cimino JJ. Colicchio TK, et al. Among authors: osborne jd. AMIA Annu Symp Proc. 2024 Jan 11;2023:309-318. eCollection 2023. AMIA Annu Symp Proc. 2024. PMID: 38222434 Free PMC article.

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