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Advancing data science in drug development through an innovative computational framework for data sharing and statistical analysis.
Mallon AM, Häring DA, Dahlke F, Aarden P, Afyouni S, Delbarre D, El Emam K, Ganjgahi H, Gardiner S, Kwok CH, West DM, Straiton E, Haemmerle S, Huffman A, Hofmann T, Kelly LJ, Krusche P, Laramee MC, Lheritier K, Ligozio G, Readie A, Santos L, Nichols TE, Branson J, Holmes C. Mallon AM, et al. Among authors: santos l. BMC Med Res Methodol. 2021 Nov 14;21(1):250. doi: 10.1186/s12874-021-01409-4. BMC Med Res Methodol. 2021. PMID: 34773974 Free PMC article.
Comparative visualization of genotype-phenotype relationships.
Yaikhom G, Morgan H, Sneddon D, Retha A, Atienza-Herrero J, Blake A, Brown J, Di Fenza A, Fiegel T, Horner N, Ring N, Santos L, Westerberg H, Brown SD, Mallon AM. Yaikhom G, et al. Among authors: santos l. Nat Methods. 2015 Aug;12(8):698-9. doi: 10.1038/nmeth.3477. Nat Methods. 2015. PMID: 26226357 Free PMC article. No abstract available.
A mouse informatics platform for phenotypic and translational discovery.
Ring N, Meehan TF, Blake A, Brown J, Chen CK, Conte N, Di Fenza A, Fiegel T, Horner N, Jacobsen JO, Karp N, Lawson T, Mason JC, Matthews P, Morgan H, Relac M, Santos L, Smedley D, Sneddon D, Pengelly A, Tudose I, Warren JW, Westerberg H, Yaikhom G, Parkinson H, Mallon AM. Ring N, et al. Among authors: santos l. Mamm Genome. 2015 Oct;26(9-10):413-21. doi: 10.1007/s00335-015-9599-2. Epub 2015 Aug 28. Mamm Genome. 2015. PMID: 26314589 Free PMC article.
The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease.
Groza T, Gomez FL, Mashhadi HH, Muñoz-Fuentes V, Gunes O, Wilson R, Cacheiro P, Frost A, Keskivali-Bond P, Vardal B, McCoy A, Cheng TK, Santos L, Wells S, Smedley D, Mallon AM, Parkinson H. Groza T, et al. Among authors: santos l. Nucleic Acids Res. 2023 Jan 6;51(D1):D1038-D1045. doi: 10.1093/nar/gkac972. Nucleic Acids Res. 2023. PMID: 36305825 Free PMC article.
Genome-wide screening reveals the genetic basis of mammalian embryonic eye development.
Chee JM, Lanoue L, Clary D, Higgins K, Bower L, Flenniken A, Guo R, Adams DJ, Bosch F, Braun RE, Brown SDM, Chin HG, Dickinson ME, Hsu CW, Dobbie M, Gao X, Galande S, Grobler A, Heaney JD, Herault Y, de Angelis MH, Mammano F, Nutter LMJ, Parkinson H, Qin C, Shiroishi T, Sedlacek R, Seong JK, Xu Y; International Mouse Phenotyping Consortium; Brooks B, McKerlie C, Lloyd KCK, Westerberg H, Moshiri A. Chee JM, et al. BMC Biol. 2023 Feb 3;21(1):22. doi: 10.1186/s12915-022-01475-0. BMC Biol. 2023. PMID: 36737727 Free PMC article.
Response to anti-IL17 therapy in inflammatory disease is not strongly impacted by genetic background.
Zhang C, Shestopaloff K, Hollis B, Kwok CH, Hon C, Hartmann N, Tian C, Wozniak M, Santos L, West D, Gardiner S, Mallon AM, Readie A, Martin R, Nichols T, Beste MT, Zierer J, Ferrero E, Vandemeulebroecke M, Jostins-Dean L. Zhang C, et al. Among authors: santos l. Am J Hum Genet. 2023 Oct 5;110(10):1817-1824. doi: 10.1016/j.ajhg.2023.08.010. Epub 2023 Sep 1. Am J Hum Genet. 2023. PMID: 37659414 Free PMC article.
A framework for longitudinal latent factor modelling of treatment response in clinical trials with applications to Psoriatic Arthritis and Rheumatoid Arthritis.
Falck F, Zhu X, Ghalebikesabi S, Kormaksson M, Vandemeulebroecke M, Zhang C, Martin R, Gardiner S, Kwok CH, West DM, Santos L, Tian C, Pang Y, Readie A, Ligozio G, Gandhi KK, Nichols TE, Mallon AM, Kelly L, Ohlssen D, Nicholson G. Falck F, et al. Among authors: santos l. J Biomed Inform. 2024 Jun;154:104641. doi: 10.1016/j.jbi.2024.104641. Epub 2024 Apr 18. J Biomed Inform. 2024. PMID: 38642627 Free article.
A bioimage informatics platform for high-throughput embryo phenotyping.
Brown JM, Horner NR, Lawson TN, Fiegel T, Greenaway S, Morgan H, Ring N, Santos L, Sneddon D, Teboul L, Vibert J, Yaikhom G, Westerberg H, Mallon AM. Brown JM, et al. Among authors: santos l. Brief Bioinform. 2018 Jan 1;19(1):41-51. doi: 10.1093/bib/bbw101. Brief Bioinform. 2018. PMID: 27742664 Free PMC article.
Prevalence of sexual dimorphism in mammalian phenotypic traits.
Karp NA, Mason J, Beaudet AL, Benjamini Y, Bower L, Braun RE, Brown SDM, Chesler EJ, Dickinson ME, Flenniken AM, Fuchs H, Angelis MH, Gao X, Guo S, Greenaway S, Heller R, Herault Y, Justice MJ, Kurbatova N, Lelliott CJ, Lloyd KCK, Mallon AM, Mank JE, Masuya H, McKerlie C, Meehan TF, Mott RF, Murray SA, Parkinson H, Ramirez-Solis R, Santos L, Seavitt JR, Smedley D, Sorg T, Speak AO, Steel KP, Svenson KL; International Mouse Phenotyping Consortium; Wakana S, West D, Wells S, Westerberg H, Yaacoby S, White JK. Karp NA, et al. Among authors: santos l. Nat Commun. 2017 Jun 26;8:15475. doi: 10.1038/ncomms15475. Nat Commun. 2017. PMID: 28650954 Free PMC article.
5,215 results