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A Uniform Computational Approach Improved on Existing Pipelines to Reveal Microbiome Biomarkers of Nonresponse to Immune Checkpoint Inhibitors.
Shaikh FY, White JR, Gills JJ, Hakozaki T, Richard C, Routy B, Okuma Y, Usyk M, Pandey A, Weber JS, Ahn J, Lipson EJ, Naidoo J, Pardoll DM, Sears CL. Shaikh FY, et al. Among authors: usyk m. Clin Cancer Res. 2021 May 1;27(9):2571-2583. doi: 10.1158/1078-0432.CCR-20-4834. Epub 2021 Feb 16. Clin Cancer Res. 2021. PMID: 33593881 Free PMC article.
Menopause Is Associated with an Altered Gut Microbiome and Estrobolome, with Implications for Adverse Cardiometabolic Risk in the Hispanic Community Health Study/Study of Latinos.
Peters BA, Lin J, Qi Q, Usyk M, Isasi CR, Mossavar-Rahmani Y, Derby CA, Santoro N, Perreira KM, Daviglus ML, Kominiarek MA, Cai J, Knight R, Burk RD, Kaplan RC. Peters BA, et al. Among authors: usyk m. mSystems. 2022 Jun 28;7(3):e0027322. doi: 10.1128/msystems.00273-22. Epub 2022 Apr 13. mSystems. 2022. PMID: 35675542 Free PMC article.
Gut Microbiota, Plasma Metabolomic Profiles, and Carotid Artery Atherosclerosis in HIV Infection.
Wang Z, Peters BA, Usyk M, Xing J, Hanna DB, Wang T, Post WS, Landay AL, Hodis HN, Weber K, French A, Golub ET, Lazar J, Gustafson D, Kassaye S, Aouizerat B, Haberlen S, Malvestutto C, Budoff M, Wolinsky SM, Sharma A, Anastos K, Clish CB, Kaplan RC, Burk RD, Qi Q. Wang Z, et al. Among authors: usyk m. Arterioscler Thromb Vasc Biol. 2022 Aug;42(8):1081-1093. doi: 10.1161/ATVBAHA.121.317276. Epub 2022 Jun 9. Arterioscler Thromb Vasc Biol. 2022. PMID: 35678187 Free PMC article.
Comprehensive evaluation of shotgun metagenomics, amplicon sequencing, and harmonization of these platforms for epidemiological studies.
Usyk M, Peters BA, Karthikeyan S, McDonald D, Sollecito CC, Vazquez-Baeza Y, Shaffer JP, Gellman MD, Talavera GA, Daviglus ML, Thyagarajan B, Knight R, Qi Q, Kaplan R, Burk RD. Usyk M, et al. Cell Rep Methods. 2023 Jan 23;3(1):100391. doi: 10.1016/j.crmeth.2022.100391. eCollection 2023 Jan 23. Cell Rep Methods. 2023. PMID: 36814836 Free PMC article.
42 results