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Cancer aneuploidies are shaped primarily by effects on tumour fitness.
Shih J, Sarmashghi S, Zhakula-Kostadinova N, Zhang S, Georgis Y, Hoyt SH, Cuoco MS, Gao GF, Spurr LF, Berger AC, Ha G, Rendo V, Shen H, Meyerson M, Cherniack AD, Taylor AM, Beroukhim R. Shih J, et al. Among authors: sarmashghi s. Nature. 2023 Jul;619(7971):793-800. doi: 10.1038/s41586-023-06266-3. Epub 2023 Jun 28. Nature. 2023. PMID: 37380777 Free PMC article.
FastViFi: Fast and accurate detection of (Hybrid) Viral DNA and RNA.
Javadzadeh S, Rajkumar U, Nguyen N, Sarmashghi S, Luebeck J, Shang J, Bafna V. Javadzadeh S, et al. Among authors: sarmashghi s. NAR Genom Bioinform. 2022 Apr 26;4(2):lqac032. doi: 10.1093/nargab/lqac032. eCollection 2022 Jun. NAR Genom Bioinform. 2022. PMID: 35493723 Free PMC article.