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Plant GARDEN: a portal website for cross-searching between different types of genomic and genetic resources in a wide variety of plant species.
Ichihara H, Yamada M, Kohara M, Hirakawa H, Ghelfi A, Tamura T, Nakaya A, Nakamura Y, Shirasawa S, Yamashita S, Toda Y, Harada D, Fujishiro T, Komaki A, Fawcett JA, Sugihara E, Tabata S, Isobe SN. Ichihara H, et al. Among authors: kohara m. BMC Plant Biol. 2023 Aug 12;23(1):391. doi: 10.1186/s12870-023-04392-8. BMC Plant Biol. 2023. PMID: 37568098 Free PMC article.
In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut.
Shirasawa K, Koilkonda P, Aoki K, Hirakawa H, Tabata S, Watanabe M, Hasegawa M, Kiyoshima H, Suzuki S, Kuwata C, Naito Y, Kuboyama T, Nakaya A, Sasamoto S, Watanabe A, Kato M, Kawashima K, Kishida Y, Kohara M, Kurabayashi A, Takahashi C, Tsuruoka H, Wada T, Isobe S. Shirasawa K, et al. Among authors: kohara m. BMC Plant Biol. 2012 Jun 6;12:80. doi: 10.1186/1471-2229-12-80. BMC Plant Biol. 2012. PMID: 22672714 Free PMC article.
CyanoBase: the cyanobacteria genome database update 2010.
Nakao M, Okamoto S, Kohara M, Fujishiro T, Fujisawa T, Sato S, Tabata S, Kaneko T, Nakamura Y. Nakao M, et al. Among authors: kohara m. Nucleic Acids Res. 2010 Jan;38(Database issue):D379-81. doi: 10.1093/nar/gkp915. Epub 2009 Oct 30. Nucleic Acids Res. 2010. PMID: 19880388 Free PMC article.
SNP discovery and linkage map construction in cultivated tomato.
Shirasawa K, Isobe S, Hirakawa H, Asamizu E, Fukuoka H, Just D, Rothan C, Sasamoto S, Fujishiro T, Kishida Y, Kohara M, Tsuruoka H, Wada T, Nakamura Y, Sato S, Tabata S. Shirasawa K, et al. Among authors: kohara m. DNA Res. 2010 Dec;17(6):381-91. doi: 10.1093/dnares/dsq024. Epub 2010 Nov 2. DNA Res. 2010. PMID: 21044984 Free PMC article.
Construction of an integrated high density simple sequence repeat linkage map in cultivated strawberry (Fragaria × ananassa) and its applicability.
Isobe SN, Hirakawa H, Sato S, Maeda F, Ishikawa M, Mori T, Yamamoto Y, Shirasawa K, Kimura M, Fukami M, Hashizume F, Tsuji T, Sasamoto S, Kato M, Nanri K, Tsuruoka H, Minami C, Takahashi C, Wada T, Ono A, Kawashima K, Nakazaki N, Kishida Y, Kohara M, Nakayama S, Yamada M, Fujishiro T, Watanabe A, Tabata S. Isobe SN, et al. Among authors: kohara m. DNA Res. 2013 Feb;20(1):79-92. doi: 10.1093/dnares/dss035. Epub 2012 Dec 17. DNA Res. 2013. PMID: 23248204 Free PMC article.
Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don.
Hirakawa H, Okada Y, Tabuchi H, Shirasawa K, Watanabe A, Tsuruoka H, Minami C, Nakayama S, Sasamoto S, Kohara M, Kishida Y, Fujishiro T, Kato M, Nanri K, Komaki A, Yoshinaga M, Takahata Y, Tanaka M, Tabata S, Isobe SN. Hirakawa H, et al. Among authors: kohara m. DNA Res. 2015 Apr;22(2):171-9. doi: 10.1093/dnares/dsv002. Epub 2015 Mar 24. DNA Res. 2015. PMID: 25805887 Free PMC article.
Comprehensive structural analysis of the genome of red clover (Trifolium pratense L.).
Sato S, Isobe S, Asamizu E, Ohmido N, Kataoka R, Nakamura Y, Kaneko T, Sakurai N, Okumura K, Klimenko I, Sasamoto S, Wada T, Watanabe A, Kohara M, Fujishiro T, Tabata S. Sato S, et al. Among authors: kohara m. DNA Res. 2005;12(5):301-64. doi: 10.1093/dnares/dsi018. Epub 2006 Jan 11. DNA Res. 2005. PMID: 16769692 Free article.
Sequence analysis of the genome of an oil-bearing tree, Jatropha curcas L.
Sato S, Hirakawa H, Isobe S, Fukai E, Watanabe A, Kato M, Kawashima K, Minami C, Muraki A, Nakazaki N, Takahashi C, Nakayama S, Kishida Y, Kohara M, Yamada M, Tsuruoka H, Sasamoto S, Tabata S, Aizu T, Toyoda A, Shin-i T, Minakuchi Y, Kohara Y, Fujiyama A, Tsuchimoto S, Kajiyama S, Makigano E, Ohmido N, Shibagaki N, Cartagena JA, Wada N, Kohinata T, Atefeh A, Yuasa S, Matsunaga S, Fukui K. Sato S, et al. Among authors: kohara y, kohara m. DNA Res. 2011 Feb;18(1):65-76. doi: 10.1093/dnares/dsq030. Epub 2010 Dec 13. DNA Res. 2011. PMID: 21149391 Free PMC article.
An EST-SSR linkage map of Raphanus sativus and comparative genomics of the Brassicaceae.
Shirasawa K, Oyama M, Hirakawa H, Sato S, Tabata S, Fujioka T, Kimizuka-Takagi C, Sasamoto S, Watanabe A, Kato M, Kishida Y, Kohara M, Takahashi C, Tsuruoka H, Wada T, Sakai T, Isobe S. Shirasawa K, et al. Among authors: kohara m. DNA Res. 2011 Aug;18(4):221-32. doi: 10.1093/dnares/dsr013. Epub 2011 Jun 13. DNA Res. 2011. PMID: 21669962 Free PMC article.
Sequence analysis of the genome of carnation (Dianthus caryophyllus L.).
Yagi M, Kosugi S, Hirakawa H, Ohmiya A, Tanase K, Harada T, Kishimoto K, Nakayama M, Ichimura K, Onozaki T, Yamaguchi H, Sasaki N, Miyahara T, Nishizaki Y, Ozeki Y, Nakamura N, Suzuki T, Tanaka Y, Sato S, Shirasawa K, Isobe S, Miyamura Y, Watanabe A, Nakayama S, Kishida Y, Kohara M, Tabata S. Yagi M, et al. Among authors: kohara m. DNA Res. 2014 Jun;21(3):231-41. doi: 10.1093/dnares/dst053. Epub 2013 Dec 17. DNA Res. 2014. PMID: 24344172 Free PMC article.
412 results