Ji S - Search Results

1

Ubiquitin signaling and the proteasome drive human DNA-protein crosslink repair.

Essawy M, Chesner L, Alshareef D, Ji S, Tretyakova N, Campbell C. Essawy M, et al. Among authors: ji s. Nucleic Acids Res. 2023 Dec 11;51(22):12174-12184. doi: 10.1093/nar/gkad860. Nucleic Acids Res. 2023. PMID: 37843153 Free PMC article.

2

DNA-Protein Cross-Links: Formation, Structural Identities, and Biological Outcomes.

Tretyakova NY, Groehler A 4th, Ji S. Tretyakova NY, et al. Among authors: ji s. Acc Chem Res. 2015 Jun 16;48(6):1631-44. doi: 10.1021/acs.accounts.5b00056. Epub 2015 Jun 2. Acc Chem Res. 2015. PMID: 26032357 Free PMC article.

3

5-Formylcytosine mediated DNA-protein cross-links block DNA replication and induce mutations in human cells.

Ji S, Fu I, Naldiga S, Shao H, Basu AK, Broyde S, Tretyakova NY. Ji S, et al. Nucleic Acids Res. 2018 Jul 27;46(13):6455-6469. doi: 10.1093/nar/gky444. Nucleic Acids Res. 2018. PMID: 29905846 Free PMC article.

4

Corrigendum: 5-Formylcytosine mediated DNA-protein cross-links block DNA replication and induce mutations in human cells.

Ji S, Fu I, Naldiga S, Shao H, Basu AK, Broyde S, Tretyakova NY. Ji S, et al. Nucleic Acids Res. 2018 Oct 12;46(18):9892. doi: 10.1093/nar/gky809. Nucleic Acids Res. 2018. PMID: 30184121 Free PMC article. No abstract available.

5

5-Formylcytosine-induced DNA-peptide cross-links reduce transcription efficiency, but do not cause transcription errors in human cells.

Ji S, Park D, Kropachev K, Kolbanovskiy M, Fu I, Broyde S, Essawy M, Geacintov NE, Tretyakova NY. Ji S, et al. J Biol Chem. 2019 Nov 29;294(48):18387-18397. doi: 10.1074/jbc.RA119.009834. Epub 2019 Oct 9. J Biol Chem. 2019. PMID: 31597704 Free PMC article.

6

Base Excision Repair of N⁶-Deoxyadenosine Adducts of 1,3-Butadiene.

Wickramaratne S, Banda DM, Ji S, Manlove AH, Malayappan B, Nuñez NN, Samson L, Campbell C, David SS, Tretyakova N. Wickramaratne S, et al. Among authors: ji s. Biochemistry. 2016 Nov 1;55(43):6070-6081. doi: 10.1021/acs.biochem.6b00553. Epub 2016 Oct 21. Biochemistry. 2016. PMID: 27552084 Free PMC article.

7

Mutagenicity of a Model DNA-Peptide Cross-Link in Human Cells: Roles of Translesion Synthesis DNA Polymerases.

Pande P, Ji S, Mukherjee S, Schärer OD, Tretyakova NY, Basu AK. Pande P, et al. Among authors: ji s. Chem Res Toxicol. 2017 Feb 20;30(2):669-677. doi: 10.1021/acs.chemrestox.6b00397. Epub 2016 Dec 21. Chem Res Toxicol. 2017. PMID: 27951635 Free PMC article.

8

Site-specific cross-linking of proteins to DNA via a new bioorthogonal approach employing oxime ligation.

Pujari SS , Zhang Y , Ji S , Distefano MD , Tretyakova NY . Pujari SS , et al. Among authors: ji s. Chem Commun (Camb). 2018 Jun 14;54(49):6296-6299. doi: 10.1039/c8cc01300d. Chem Commun (Camb). 2018. PMID: 29851420 Free PMC article.

9

Reversible DNA-Protein Cross-Linking at Epigenetic DNA Marks.

Ji S, Shao H, Han Q, Seiler CL, Tretyakova NY. Ji S, et al. Angew Chem Int Ed Engl. 2017 Nov 6;56(45):14130-14134. doi: 10.1002/anie.201708286. Epub 2017 Oct 6. Angew Chem Int Ed Engl. 2017. PMID: 28898504 Free PMC article.

10

Error-prone replication of a 5-formylcytosine-mediated DNA-peptide cross-link in human cells.

Naldiga S, Ji S, Thomforde J, Nicolae CM, Lee M, Zhang Z, Moldovan GL, Tretyakova NY, Basu AK. Naldiga S, et al. Among authors: ji s. J Biol Chem. 2019 Jul 5;294(27):10619-10627. doi: 10.1074/jbc.RA119.008879. Epub 2019 May 28. J Biol Chem. 2019. PMID: 31138652 Free PMC article.

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