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MolDStruct: Modeling the dynamics and structure of matter exposed to ultrafast x-ray lasers with hybrid collisional-radiative/molecular dynamics.
J Chem Phys. 2024 May 14;160(18):184112. doi: 10.1063/5.0197225.
J Chem Phys. 2024.
PMID: 38726930
Computational study of diffraction image formation from XFEL irradiated single ribosome molecule.
Stransky M, E J, Jurek Z, Santra R, Bean R, Ziaja B, Mancuso AP.
Stransky M, et al. Among authors: e j.
Sci Rep. 2024 May 9;14(1):10617. doi: 10.1038/s41598-024-61314-w.
Sci Rep. 2024.
PMID: 38720133
Free PMC article.
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Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS).
Blanchet CE, Round A, Mertens HDT, Ayyer K, Graewert M, Awel S, Franke D, Dörner K, Bajt S, Bean R, Custódio TF, de Wijn R, Juncheng E, Henkel A, Gruzinov A, Jeffries CM, Kim Y, Kirkwood H, Kloos M, Knoška J, Koliyadu J, Letrun R, Löw C, Makroczyova J, Mall A, Meijers R, Pena Murillo GE, Oberthür D, Round E, Seuring C, Sikorski M, Vagovic P, Valerio J, Wollweber T, Zhuang Y, Schulz J, Haas H, Chapman HN, Mancuso AP, Svergun D.
Blanchet CE, et al. Among authors: juncheng e.
Commun Biol. 2023 Oct 18;6(1):1057. doi: 10.1038/s42003-023-05416-7.
Commun Biol. 2023.
PMID: 37853181
Free PMC article.
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Water layer and radiation damage effects on the orientation recovery of proteins in single-particle imaging at an X-ray free-electron laser.
E J, Stransky M, Shen Z, Jurek Z, Fortmann-Grote C, Bean R, Santra R, Ziaja B, Mancuso AP.
E J, et al.
Sci Rep. 2023 Sep 29;13(1):16359. doi: 10.1038/s41598-023-43298-1.
Sci Rep. 2023.
PMID: 37773512
Free PMC article.
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Expected resolution limits of x-ray free-electron laser single-particle imaging for realistic source and detector properties.
E J, Kim Y, Bielecki J, Sikorski M, de Wijn R, Fortmann-Grote C, Sztuk-Dambietz J, Koliyadu JCP, Letrun R, Kirkwood HJ, Sato T, Bean R, Mancuso AP, Kim C.
E J, et al.
Struct Dyn. 2022 Nov 16;9(6):064101. doi: 10.1063/4.0000169. eCollection 2022 Nov.
Struct Dyn. 2022.
PMID: 36411869
Free PMC article.
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Pump-probe capabilities at the SPB/SFX instrument of the European XFEL.
Koliyadu JCP, Letrun R, Kirkwood HJ, Liu J, Jiang M, Emons M, Bean R, Bellucci V, Bielecki J, Birnsteinova S, de Wijn R, Dietze T, E J, Grünert J, Kane D, Kim C, Kim Y, Lederer M, Manning B, Mills G, Morillo LL, Reimers N, Rompotis D, Round A, Sikorski M, Takem CMS, Vagovič P, Venkatesan S, Wang J, Wegner U, Mancuso AP, Sato T.
Koliyadu JCP, et al. Among authors: e j.
J Synchrotron Radiat. 2022 Sep 1;29(Pt 5):1273-1283. doi: 10.1107/S1600577522006701. Epub 2022 Jul 21.
J Synchrotron Radiat. 2022.
PMID: 36073887
Free PMC article.
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Ultrafast visualization of incipient plasticity in dynamically compressed matter.
Mo M, Tang M, Chen Z, Peterson JR, Shen X, Baldwin JK, Frost M, Kozina M, Reid A, Wang Y, E J, Descamps A, Ofori-Okai BK, Li R, Luo SN, Wang X, Glenzer S.
Mo M, et al. Among authors: e j.
Nat Commun. 2022 Feb 25;13(1):1055. doi: 10.1038/s41467-022-28684-z.
Nat Commun. 2022.
PMID: 35217665
Free PMC article.
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Effects of radiation damage and inelastic scattering on single-particle imaging of hydrated proteins with an X-ray Free-Electron Laser.
E J, Stransky M, Jurek Z, Fortmann-Grote C, Juha L, Santra R, Ziaja B, Mancuso AP.
E J, et al.
Sci Rep. 2021 Sep 9;11(1):17976. doi: 10.1038/s41598-021-97142-5.
Sci Rep. 2021.
PMID: 34504156
Free PMC article.
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