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Many-core algorithms for statistical phylogenetics.
Suchard MA, Rambaut A. Suchard MA, et al. Among authors: rambaut a. Bioinformatics. 2009 Jun 1;25(11):1370-6. doi: 10.1093/bioinformatics/btp244. Epub 2009 Apr 15. Bioinformatics. 2009. PMID: 19369496 Free PMC article.
Bayesian phylogeography finds its roots.
Lemey P, Rambaut A, Drummond AJ, Suchard MA. Lemey P, et al. Among authors: rambaut a. PLoS Comput Biol. 2009 Sep;5(9):e1000520. doi: 10.1371/journal.pcbi.1000520. Epub 2009 Sep 25. PLoS Comput Biol. 2009. PMID: 19779555 Free PMC article.
A Bayesian phylogenetic method to estimate unknown sequence ages.
Shapiro B, Ho SY, Drummond AJ, Suchard MA, Pybus OG, Rambaut A. Shapiro B, et al. Among authors: rambaut a. Mol Biol Evol. 2011 Feb;28(2):879-87. doi: 10.1093/molbev/msq262. Epub 2010 Oct 1. Mol Biol Evol. 2011. PMID: 20889726 Free PMC article.
Phylodynamics and human-mediated dispersal of a zoonotic virus.
Talbi C, Lemey P, Suchard MA, Abdelatif E, Elharrak M, Nourlil J, Faouzi A, Echevarría JE, Vazquez Morón S, Rambaut A, Campiz N, Tatem AJ, Holmes EC, Bourhy H. Talbi C, et al. Among authors: rambaut a. PLoS Pathog. 2010 Oct 28;6(10):e1001166. doi: 10.1371/journal.ppat.1001166. PLoS Pathog. 2010. PMID: 21060816 Free PMC article.
Spatial dynamics of human-origin H1 influenza A virus in North American swine.
Nelson MI, Lemey P, Tan Y, Vincent A, Lam TT, Detmer S, Viboud C, Suchard MA, Rambaut A, Holmes EC, Gramer M. Nelson MI, et al. Among authors: rambaut a. PLoS Pathog. 2011 Jun;7(6):e1002077. doi: 10.1371/journal.ppat.1002077. Epub 2011 Jun 9. PLoS Pathog. 2011. PMID: 21695237 Free PMC article.
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics.
Bielejec F, Rambaut A, Suchard MA, Lemey P. Bielejec F, et al. Among authors: rambaut a. Bioinformatics. 2011 Oct 15;27(20):2910-2. doi: 10.1093/bioinformatics/btr481. Epub 2011 Sep 11. Bioinformatics. 2011. PMID: 21911333 Free PMC article.
353 results