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An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments.
Schadt C, Martin S, Carrell A, Fortner A, Hopp D, Jacobson D, Klingeman D, Kristy B, Phillips J, Piatkowski B, Miller MA, Smith M, Patil S, Flynn M, Canon S, Clum A, Mungall CJ, Pennacchio C, Bowen B, Louie K, Northen T, Eloe-Fadrosh EA, Mayes MA, Muchero W, Weston DJ, Mitchell J, Doktycz M. Schadt C, et al. Among authors: doktycz m. Sci Data. 2024 Apr 5;11(1):339. doi: 10.1038/s41597-024-03069-7. Sci Data. 2024. PMID: 38580669 Free PMC article.
Abiotic Stresses Shift Belowground Populus-Associated Bacteria Toward a Core Stress Microbiome.
Timm CM, Carter KR, Carrell AA, Jun SR, Jawdy SS, Vélez JM, Gunter LE, Yang Z, Nookaew I, Engle NL, Lu TS, Schadt CW, Tschaplinski TJ, Doktycz MJ, Tuskan GA, Pelletier DA, Weston DJ. Timm CM, et al. Among authors: doktycz mj. mSystems. 2018 Jan 23;3(1):e00070-17. doi: 10.1128/mSystems.00070-17. eCollection 2018 Jan-Feb. mSystems. 2018. PMID: 29404422 Free PMC article.
Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment.
Timm CM, Campbell AG, Utturkar SM, Jun SR, Parales RE, Tan WA, Robeson MS, Lu TY, Jawdy S, Brown SD, Ussery DW, Schadt CW, Tuskan GA, Doktycz MJ, Weston DJ, Pelletier DA. Timm CM, et al. Among authors: doktycz mj. Front Microbiol. 2015 Oct 14;6:1118. doi: 10.3389/fmicb.2015.01118. eCollection 2015. Front Microbiol. 2015. PMID: 26528266 Free PMC article.
Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis.
Utturkar SM, Cude WN, Robeson MS Jr, Yang ZK, Klingeman DM, Land ML, Allman SL, Lu TY, Brown SD, Schadt CW, Podar M, Doktycz MJ, Pelletier DA. Utturkar SM, et al. Among authors: doktycz mj. Appl Environ Microbiol. 2016 Aug 30;82(18):5698-708. doi: 10.1128/AEM.01285-16. Print 2016 Sep 15. Appl Environ Microbiol. 2016. PMID: 27422831 Free PMC article.
Cultivating the Bacterial Microbiota of Populus Roots.
Carper DL, Weston DJ, Barde A, Timm CM, Lu TY, Burdick LH, Jawdy SS, Klingeman DM, Robeson MS 2nd, Veach AM, Cregger MA, Kalluri UC, Schadt CW, Podar M, Doktycz MJ, Pelletier DA. Carper DL, et al. Among authors: doktycz mj. mSystems. 2021 Jun 29;6(3):e0130620. doi: 10.1128/mSystems.01306-20. Epub 2021 Jun 22. mSystems. 2021. PMID: 34156297 Free PMC article.
Pseudomonas fluorescens induces strain-dependent and strain-independent host plant responses in defense networks, primary metabolism, photosynthesis, and fitness.
Weston DJ, Pelletier DA, Morrell-Falvey JL, Tschaplinski TJ, Jawdy SS, Lu TY, Allen SM, Melton SJ, Martin MZ, Schadt CW, Karve AA, Chen JG, Yang X, Doktycz MJ, Tuskan GA. Weston DJ, et al. Among authors: doktycz mj. Mol Plant Microbe Interact. 2012 Jun;25(6):765-78. doi: 10.1094/MPMI-09-11-0253. Mol Plant Microbe Interact. 2012. PMID: 22375709 Free article.
143 results