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An open source knowledge graph ecosystem for the life sciences.
Sci Data. 2024 Apr 11;11(1):363. doi: 10.1038/s41597-024-03171-w.
Sci Data. 2024.
PMID: 38605048
Free PMC article.
Causal feature selection using a knowledge graph combining structured knowledge from the biomedical literature and ontologies: A use case studying depression as a risk factor for Alzheimer's disease.
Malec SA, Taneja SB, Albert SM, Elizabeth Shaaban C, Karim HT, Levine AS, Munro P, Callahan TJ, Boyce RD.
Malec SA, et al.
J Biomed Inform. 2023 Jun;142:104368. doi: 10.1016/j.jbi.2023.104368. Epub 2023 Apr 21.
J Biomed Inform. 2023.
PMID: 37086959
Free PMC article.
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Using computable knowledge mined from the literature to elucidate confounders for EHR-based pharmacovigilance.
Malec SA, Wei P, Bernstam EV, Boyce RD, Cohen T.
Malec SA, et al.
J Biomed Inform. 2021 May;117:103719. doi: 10.1016/j.jbi.2021.103719. Epub 2021 Mar 11.
J Biomed Inform. 2021.
PMID: 33716168
Free PMC article.
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Exploring Novel Computable Knowledge in Structured Drug Product Labels.
Malec SA, Boyce RD.
Malec SA, et al.
AMIA Jt Summits Transl Sci Proc. 2020 May 30;2020:403-412. eCollection 2020.
AMIA Jt Summits Transl Sci Proc. 2020.
PMID: 32477661
Free PMC article.
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Literature-Based Discovery of Confounding in Observational Clinical Data.
Malec SA, Wei P, Xu H, Bernstam EV, Myneni S, Cohen T.
Malec SA, et al.
AMIA Annu Symp Proc. 2017 Feb 10;2016:1920-1929. eCollection 2016.
AMIA Annu Symp Proc. 2017.
PMID: 28269951
Free PMC article.
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