1R01HG003521-01/HG/NHGRI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2006	3
2007	3
2008	2
2009	1
2010	1
2024	0

1

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells.

Chen X, Xu H, Yuan P, Fang F, Huss M, Vega VB, Wong E, Orlov YL, Zhang W, Jiang J, Loh YH, Yeo HC, Yeo ZX, Narang V, Govindarajan KR, Leong B, Shahab A, Ruan Y, Bourque G, Sung WK, Clarke ND, Wei CL, Ng HH. Chen X, et al. Cell. 2008 Jun 13;133(6):1106-17. doi: 10.1016/j.cell.2008.04.043. Cell. 2008. PMID: 18555785 Free article.

2

Pathway aberrations of murine melanoma cells observed in Paired-End diTag transcriptomes.

Chiu KP, Ariyaratne P, Xu H, Tan A, Ng P, Liu ET, Ruan Y, Wei CL, Sung WK. Chiu KP, et al. BMC Cancer. 2007 Jun 26;7:109. doi: 10.1186/1471-2407-7-109. BMC Cancer. 2007. PMID: 17594473 Free PMC article.

3

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

Ghisletti S, Barozzi I, Mietton F, Polletti S, De Santa F, Venturini E, Gregory L, Lonie L, Chew A, Wei CL, Ragoussis J, Natoli G. Ghisletti S, et al. Immunity. 2010 Mar 26;32(3):317-28. doi: 10.1016/j.immuni.2010.02.008. Epub 2010 Mar 4. Immunity. 2010. PMID: 20206554 Free article.

4

The use of multiple displacement amplification to amplify complex DNA libraries.

Fullwood MJ, Tan JJ, Ng PW, Chiu KP, Liu J, Wei CL, Ruan Y. Fullwood MJ, et al. Nucleic Acids Res. 2008 Mar;36(5):e32. doi: 10.1093/nar/gkn074. Epub 2008 Feb 19. Nucleic Acids Res. 2008. PMID: 18285362 Free PMC article.

5

Jmjd3 contributes to the control of gene expression in LPS-activated macrophages.

De Santa F, Narang V, Yap ZH, Tusi BK, Burgold T, Austenaa L, Bucci G, Caganova M, Notarbartolo S, Casola S, Testa G, Sung WK, Wei CL, Natoli G. De Santa F, et al. EMBO J. 2009 Nov 4;28(21):3341-52. doi: 10.1038/emboj.2009.271. Epub 2009 Sep 24. EMBO J. 2009. PMID: 19779457 Free PMC article.

6

Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells.

Zhao XD, Han X, Chew JL, Liu J, Chiu KP, Choo A, Orlov YL, Sung WK, Shahab A, Kuznetsov VA, Bourque G, Oh S, Ruan Y, Ng HH, Wei CL. Zhao XD, et al. Cell Stem Cell. 2007 Sep 13;1(3):286-98. doi: 10.1016/j.stem.2007.08.004. Cell Stem Cell. 2007. PMID: 18371363 Free article.

7

PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data.

Chiu KP, Wong CH, Chen Q, Ariyaratne P, Ooi HS, Wei CL, Sung WK, Ruan Y. Chiu KP, et al. BMC Bioinformatics. 2006 Aug 25;7:390. doi: 10.1186/1471-2105-7-390. BMC Bioinformatics. 2006. PMID: 16934139 Free PMC article.

8

Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs).

Ruan Y, Ooi HS, Choo SW, Chiu KP, Zhao XD, Srinivasan KG, Yao F, Choo CY, Liu J, Ariyaratne P, Bin WG, Kuznetsov VA, Shahab A, Sung WK, Bourque G, Palanisamy N, Wei CL. Ruan Y, et al. Genome Res. 2007 Jun;17(6):828-38. doi: 10.1101/gr.6018607. Genome Res. 2007. PMID: 17568001 Free PMC article.

9

Multiplex sequencing of paired-end ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes.

Ng P, Tan JJ, Ooi HS, Lee YL, Chiu KP, Fullwood MJ, Srinivasan KG, Perbost C, Du L, Sung WK, Wei CL, Ruan Y. Ng P, et al. Nucleic Acids Res. 2006 Jul 13;34(12):e84. doi: 10.1093/nar/gkl444. Nucleic Acids Res. 2006. PMID: 16840528 Free PMC article.

10

Global mapping of c-Myc binding sites and target gene networks in human B cells.

Zeller KI, Zhao X, Lee CW, Chiu KP, Yao F, Yustein JT, Ooi HS, Orlov YL, Shahab A, Yong HC, Fu Y, Weng Z, Kuznetsov VA, Sung WK, Ruan Y, Dang CV, Wei CL. Zeller KI, et al. Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17834-9. doi: 10.1073/pnas.0604129103. Epub 2006 Nov 8. Proc Natl Acad Sci U S A. 2006. PMID: 17093053 Free PMC article.

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