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Online Phylogenetics with matOptimize Produces Equivalent Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Implementations.
Syst Biol. 2023 Nov 1;72(5):1039-1051. doi: 10.1093/sysbio/syad031.
Syst Biol. 2023.
PMID: 37232476
Free PMC article.
Limited genomic signatures of population collapse in the critically endangered black abalone (Haliotis cracherodii).
Wooldridge B, Orland C, Enbody E, Escalona M, Mirchandani C, Corbett-Detig R, Kapp JD, Fletcher N, Cox-Ammann K, Raimondi P, Shapiro B.
Wooldridge B, et al.
Mol Ecol. 2024 Apr 29:e17362. doi: 10.1111/mec.17362. Online ahead of print.
Mol Ecol. 2024.
PMID: 38682494
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