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Page 1
Protein Bioinformatics Databases and Resources.
Chen C, Huang H, Wu CH. Chen C, et al. Methods Mol Biol. 2017;1558:3-39. doi: 10.1007/978-1-4939-6783-4_1. Methods Mol Biol. 2017. PMID: 28150231 Free PMC article. Review.
UniProt Protein Knowledgebase.
Pundir S, Martin MJ, O'Donovan C. Pundir S, et al. Methods Mol Biol. 2017;1558:41-55. doi: 10.1007/978-1-4939-6783-4_2. Methods Mol Biol. 2017. PMID: 28150232 Free PMC article.
UniProt Tools.
Pundir S, Martin MJ, O'Donovan C; UniProt Consortium. Pundir S, et al. Curr Protoc Bioinformatics. 2016 Mar 24;53:1.29.1-1.29.15. doi: 10.1002/0471250953.bi0129s53. Curr Protoc Bioinformatics. 2016. PMID: 27010333 Free PMC article.
Bacterial Virus Ontology; Coordinating across Databases.
Hulo C, Masson P, Toussaint A, Osumi-Sutherland D, de Castro E, Auchincloss AH, Poux S, Bougueleret L, Xenarios I, Le Mercier P. Hulo C, et al. Viruses. 2017 May 23;9(6):126. doi: 10.3390/v9060126. Viruses. 2017. PMID: 28545254 Free PMC article.
ProtVista: visualization of protein sequence annotations.
Watkins X, Garcia LJ, Pundir S, Martin MJ; UniProt Consortium. Watkins X, et al. Bioinformatics. 2017 Jul 1;33(13):2040-2041. doi: 10.1093/bioinformatics/btx120. Bioinformatics. 2017. PMID: 28334231 Free PMC article.
Enzyme annotation in UniProtKB using Rhea.
Morgat A, Lombardot T, Coudert E, Axelsen K, Neto TB, Gehant S, Bansal P, Bolleman J, Gasteiger E, de Castro E, Baratin D, Pozzato M, Xenarios I, Poux S, Redaschi N, Bridge A; UniProt Consortium. Morgat A, et al. Bioinformatics. 2020 Mar 1;36(6):1896-1901. doi: 10.1093/bioinformatics/btz817. Bioinformatics. 2020. PMID: 31688925 Free PMC article.
Proteomics Standards Initiative Extended FASTA Format.
Binz PA, Shofstahl J, Vizcaíno JA, Barsnes H, Chalkley RJ, Menschaert G, Alpi E, Clauser K, Eng JK, Lane L, Seymour SL, Sánchez LFH, Mayer G, Eisenacher M, Perez-Riverol Y, Kapp EA, Mendoza L, Baker PR, Collins A, Van Den Bossche T, Deutsch EW. Binz PA, et al. J Proteome Res. 2019 Jun 7;18(6):2686-2692. doi: 10.1021/acs.jproteome.9b00064. Epub 2019 May 23. J Proteome Res. 2019. PMID: 31081335 Free PMC article.
53 results