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Widespread adenine N6-methylation of active genes in fungi.
Mondo SJ, Dannebaum RO, Kuo RC, Louie KB, Bewick AJ, LaButti K, Haridas S, Kuo A, Salamov A, Ahrendt SR, Lau R, Bowen BP, Lipzen A, Sullivan W, Andreopoulos BB, Clum A, Lindquist E, Daum C, Northen TR, Kunde-Ramamoorthy G, Schmitz RJ, Gryganskyi A, Culley D, Magnuson J, James TY, O'Malley MA, Stajich JE, Spatafora JW, Visel A, Grigoriev IV. Mondo SJ, et al. Among authors: ahrendt sr. Nat Genet. 2017 Jun;49(6):964-968. doi: 10.1038/ng.3859. Epub 2017 May 8. Nat Genet. 2017. PMID: 28481340
Leveraging single-cell genomics to expand the fungal tree of life.
Ahrendt SR, Quandt CA, Ciobanu D, Clum A, Salamov A, Andreopoulos B, Cheng JF, Woyke T, Pelin A, Henrissat B, Reynolds NK, Benny GL, Smith ME, James TY, Grigoriev IV. Ahrendt SR, et al. Nat Microbiol. 2018 Dec;3(12):1417-1428. doi: 10.1038/s41564-018-0261-0. Epub 2018 Oct 8. Nat Microbiol. 2018. PMID: 30297742 Free PMC article.
A single-cell genomics pipeline for environmental microbial eukaryotes.
Ciobanu D, Clum A, Ahrendt S, Andreopoulos WB, Salamov A, Chan S, Quandt CA, Foster B, Meier-Kolthoff JP, Tang YT, Schwientek P, Benny GL, Smith ME, Bauer D, Deshpande S, Barry K, Copeland A, Singer SW, Woyke T, Grigoriev IV, James TY, Cheng JF. Ciobanu D, et al. Among authors: ahrendt s. iScience. 2021 Mar 10;24(4):102290. doi: 10.1016/j.isci.2021.102290. eCollection 2021 Apr 23. iScience. 2021. PMID: 33870123 Free PMC article.
Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies.
Chang Y, Wang Y, Mondo S, Ahrendt S, Andreopoulos W, Barry K, Beard J, Benny GL, Blankenship S, Bonito G, Cuomo C, Desiro A, Gervers KA, Hundley H, Kuo A, LaButti K, Lang BF, Lipzen A, O'Donnell K, Pangilinan J, Reynolds N, Sandor L, Smith ME, Tsang A, Grigoriev IV, Stajich JE, Spatafora JW. Chang Y, et al. Among authors: ahrendt s. iScience. 2022 Aug 2;25(8):104840. doi: 10.1016/j.isci.2022.104840. eCollection 2022 Aug 19. iScience. 2022. PMID: 35996588 Free PMC article.
Phylogeny, morphology, virulence, ecology, and host range of Ordospora pajunii (Ordosporidae), a microsporidian symbiont of Daphnia spp.
Dziuba MK, McIntire KM, Seto K, Davenport ES, Rogalski MA, Gowler CD, Baird E, Vaandrager M, Huerta C, Jaye R, Corcoran FE, Withrow A, Ahrendt S, Salamov A, Nolan M, Tejomurthula S, Barry K, Grigoriev IV, James TY, Duffy MA. Dziuba MK, et al. Among authors: ahrendt s. mBio. 2024 Apr 23:e0058224. doi: 10.1128/mbio.00582-24. Online ahead of print. mBio. 2024. PMID: 38651867 Free article.
Meeting report: fungal its workshop (october 2012).
Bates ST, Ahrendt S, Bik HM, Bruns TD, Caporaso JG, Cole J, Dwan M, Fierer N, Gu D, Houston S, Knight R, Leff J, Lewis C, Maestre JP, McDonald D, Nilsson RH, Porras-Alfaro A, Robert V, Schoch C, Scott J, Taylor DL, Parfrey LW, Stajich JE. Bates ST, et al. Among authors: ahrendt s. Stand Genomic Sci. 2013 Apr 15;8(1):118-23. doi: 10.4056/sigs.3737409. eCollection 2013 Apr 15. Stand Genomic Sci. 2013. PMID: 23961317 Free PMC article.
174 results