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High-resolution data-driven model of the mouse connectome.
Netw Neurosci. 2018 Dec 1;3(1):217-236. doi: 10.1162/netn_a_00066. eCollection 2019.
Netw Neurosci. 2018.
PMID: 30793081
Free PMC article.
Whole brain imaging reveals distinct spatial patterns of amyloid beta deposition in three mouse models of Alzheimer's disease.
Whitesell JD, Buckley AR, Knox JE, Kuan L, Graddis N, Pelos A, Mukora A, Wakeman W, Bohn P, Ho A, Hirokawa KE, Harris JA.
Whitesell JD, et al. Among authors: graddis n.
J Comp Neurol. 2019 Sep 1;527(13):2122-2145. doi: 10.1002/cne.24555. Epub 2018 Dec 4.
J Comp Neurol. 2019.
PMID: 30311654
Free PMC article.
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Hierarchical organization of cortical and thalamic connectivity.
Harris JA, Mihalas S, Hirokawa KE, Whitesell JD, Choi H, Bernard A, Bohn P, Caldejon S, Casal L, Cho A, Feiner A, Feng D, Gaudreault N, Gerfen CR, Graddis N, Groblewski PA, Henry AM, Ho A, Howard R, Knox JE, Kuan L, Kuang X, Lecoq J, Lesnar P, Li Y, Luviano J, McConoughey S, Mortrud MT, Naeemi M, Ng L, Oh SW, Ouellette B, Shen E, Sorensen SA, Wakeman W, Wang Q, Wang Y, Williford A, Phillips JW, Jones AR, Koch C, Zeng H.
Harris JA, et al. Among authors: graddis n.
Nature. 2019 Nov;575(7781):195-202. doi: 10.1038/s41586-019-1716-z. Epub 2019 Oct 30.
Nature. 2019.
PMID: 31666704
Free PMC article.
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Regional, Layer, and Cell-Type-Specific Connectivity of the Mouse Default Mode Network.
Whitesell JD, Liska A, Coletta L, Hirokawa KE, Bohn P, Williford A, Groblewski PA, Graddis N, Kuan L, Knox JE, Ho A, Wakeman W, Nicovich PR, Nguyen TN, van Velthoven CTJ, Garren E, Fong O, Naeemi M, Henry AM, Dee N, Smith KA, Levi B, Feng D, Ng L, Tasic B, Zeng H, Mihalas S, Gozzi A, Harris JA.
Whitesell JD, et al. Among authors: graddis n.
Neuron. 2021 Feb 3;109(3):545-559.e8. doi: 10.1016/j.neuron.2020.11.011. Epub 2020 Dec 7.
Neuron. 2021.
PMID: 33290731
Free PMC article.
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Survey of spiking in the mouse visual system reveals functional hierarchy.
Siegle JH, Jia X, Durand S, Gale S, Bennett C, Graddis N, Heller G, Ramirez TK, Choi H, Luviano JA, Groblewski PA, Ahmed R, Arkhipov A, Bernard A, Billeh YN, Brown D, Buice MA, Cain N, Caldejon S, Casal L, Cho A, Chvilicek M, Cox TC, Dai K, Denman DJ, de Vries SEJ, Dietzman R, Esposito L, Farrell C, Feng D, Galbraith J, Garrett M, Gelfand EC, Hancock N, Harris JA, Howard R, Hu B, Hytnen R, Iyer R, Jessett E, Johnson K, Kato I, Kiggins J, Lambert S, Lecoq J, Ledochowitsch P, Lee JH, Leon A, Li Y, Liang E, Long F, Mace K, Melchior J, Millman D, Mollenkopf T, Nayan C, Ng L, Ngo K, Nguyen T, Nicovich PR, North K, Ocker GK, Ollerenshaw D, Oliver M, Pachitariu M, Perkins J, Reding M, Reid D, Robertson M, Ronellenfitch K, Seid S, Slaughterbeck C, Stoecklin M, Sullivan D, Sutton B, Swapp J, Thompson C, Turner K, Wakeman W, Whitesell JD, Williams D, Williford A, Young R, Zeng H, Naylor S, Phillips JW, Reid RC, Mihalas S, Olsen SR, Koch C.
Siegle JH, et al. Among authors: graddis n.
Nature. 2021 Apr;592(7852):86-92. doi: 10.1038/s41586-020-03171-x. Epub 2021 Jan 20.
Nature. 2021.
PMID: 33473216
Free PMC article.
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The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.
Wang Q, Ding SL, Li Y, Royall J, Feng D, Lesnar P, Graddis N, Naeemi M, Facer B, Ho A, Dolbeare T, Blanchard B, Dee N, Wakeman W, Hirokawa KE, Szafer A, Sunkin SM, Oh SW, Bernard A, Phillips JW, Hawrylycz M, Koch C, Zeng H, Harris JA, Ng L.
Wang Q, et al. Among authors: graddis n.
Cell. 2020 May 14;181(4):936-953.e20. doi: 10.1016/j.cell.2020.04.007. Epub 2020 May 7.
Cell. 2020.
PMID: 32386544
Free PMC article.
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Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas.
Weed N, Bakken T, Graddis N, Gouwens N, Millman D, Hawrylycz M, Waters J.
Weed N, et al. Among authors: graddis n.
PLoS One. 2019 Sep 4;14(9):e0212898. doi: 10.1371/journal.pone.0212898. eCollection 2019.
PLoS One. 2019.
PMID: 31483788
Free PMC article.
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Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse.
Waters J, Lee E, Gaudreault N, Griffin F, Lecoq J, Slaughterbeck C, Sullivan D, Farrell C, Perkins J, Reid D, Feng D, Graddis N, Garrett M, Li Y, Long F, Mochizuki C, Roll K, Zhuang J, Thompson C.
Waters J, et al. Among authors: graddis n.
PLoS One. 2019 May 1;14(5):e0213924. doi: 10.1371/journal.pone.0213924. eCollection 2019.
PLoS One. 2019.
PMID: 31042712
Free PMC article.
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