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Scalable Design of Paired CRISPR Guide RNAs for Genomic Deletion.
Pulido-Quetglas C, Aparicio-Prat E, Arnan C, Polidori T, Hermoso T, Palumbo E, Ponomarenko J, Guigo R, Johnson R. Pulido-Quetglas C, et al. Among authors: johnson r. PLoS Comput Biol. 2017 Mar 2;13(3):e1005341. doi: 10.1371/journal.pcbi.1005341. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28253259 Free PMC article.
LncATLAS database for subcellular localization of long noncoding RNAs.
Mas-Ponte D, Carlevaro-Fita J, Palumbo E, Hermoso Pulido T, Guigo R, Johnson R. Mas-Ponte D, et al. Among authors: johnson r. RNA. 2017 Jul;23(7):1080-1087. doi: 10.1261/rna.060814.117. Epub 2017 Apr 6. RNA. 2017. PMID: 28386015 Free PMC article.
Towards a complete map of the human long non-coding RNA transcriptome.
Uszczynska-Ratajczak B, Lagarde J, Frankish A, Guigó R, Johnson R. Uszczynska-Ratajczak B, et al. Among authors: johnson r. Nat Rev Genet. 2018 Sep;19(9):535-548. doi: 10.1038/s41576-018-0017-y. Nat Rev Genet. 2018. PMID: 29795125 Free PMC article. Review.
LnCompare: gene set feature analysis for human long non-coding RNAs.
Carlevaro-Fita J, Liu L, Zhou Y, Zhang S, Chouvardas P, Johnson R, Li J. Carlevaro-Fita J, et al. Among authors: johnson r. Nucleic Acids Res. 2019 Jul 2;47(W1):W523-W529. doi: 10.1093/nar/gkz410. Nucleic Acids Res. 2019. PMID: 31147707 Free PMC article.
Enhancing CRISPR deletion via pharmacological delay of DNA-PKcs.
Bosch-Guiteras N, Uroda T, Guillen-Ramirez HA, Riedo R, Gazdhar A, Esposito R, Pulido-Quetglas C, Zimmer Y, Medová M, Johnson R. Bosch-Guiteras N, et al. Among authors: johnson r. Genome Res. 2021 Mar;31(3):461-471. doi: 10.1101/gr.265736.120. Epub 2021 Feb 11. Genome Res. 2021. PMID: 33574136 Free PMC article.
13,998 results
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