Zhurkin VB - Search Results

1

Architectural accommodation in the complex of four p53 DNA binding domain peptides with the p21/waf1/cip1 DNA response element.

Nagaich AK, Zhurkin VB, Sakamoto H, Gorin AA, Clore GM, Gronenborn AM, Appella E, Harrington RE. Nagaich AK, et al. Among authors: zhurkin vb. J Biol Chem. 1997 Jun 6;272(23):14830-41. doi: 10.1074/jbc.272.23.14830. J Biol Chem. 1997. PMID: 9169452 Free article.

2

p53 binding to nucleosomal DNA depends on the rotational positioning of DNA response element.

Sahu G, Wang D, Chen CB, Zhurkin VB, Harrington RE, Appella E, Hager GL, Nagaich AK. Sahu G, et al. Among authors: zhurkin vb. J Biol Chem. 2010 Jan 8;285(2):1321-32. doi: 10.1074/jbc.M109.081182. Epub 2009 Nov 3. J Biol Chem. 2010. PMID: 19887449 Free PMC article.

3

Analysis of the interaction between the p53 binding domain and the p21/CiP1 DNA response element: a novel architectural organization.

Appella E, Nagaich AK, Zhurkin VB, Harrington RE. Appella E, et al. Among authors: zhurkin vb. J Protein Chem. 1998 Aug;17(6):527-8. J Protein Chem. 1998. PMID: 9723733 No abstract available.

4

p53-induced DNA bending and twisting: p53 tetramer binds on the outer side of a DNA loop and increases DNA twisting.

Nagaich AK, Zhurkin VB, Durell SR, Jernigan RL, Appella E, Harrington RE. Nagaich AK, et al. Among authors: zhurkin vb. Proc Natl Acad Sci U S A. 1999 Mar 2;96(5):1875-80. doi: 10.1073/pnas.96.5.1875. Proc Natl Acad Sci U S A. 1999. PMID: 10051562 Free PMC article.

5

DNA stretching and compression: large-scale simulations of double helical structures.

Kosikov KM, Gorin AA, Zhurkin VB, Olson WK. Kosikov KM, et al. Among authors: zhurkin vb. J Mol Biol. 1999 Jun 25;289(5):1301-26. doi: 10.1006/jmbi.1999.2798. J Mol Biol. 1999. PMID: 10373369

6

DNA sequence-dependent deformability deduced from protein-DNA crystal complexes.

Olson WK, Gorin AA, Lu XJ, Hock LM, Zhurkin VB. Olson WK, et al. Among authors: zhurkin vb. Proc Natl Acad Sci U S A. 1998 Sep 15;95(19):11163-8. doi: 10.1073/pnas.95.19.11163. Proc Natl Acad Sci U S A. 1998. PMID: 9736707 Free PMC article.

7

Static and statistical bending of DNA evaluated by Monte Carlo simulations.

Zhurkin VB, Ulyanov NB, Gorin AA, Jernigan RL. Zhurkin VB, et al. Proc Natl Acad Sci U S A. 1991 Aug 15;88(16):7046-50. doi: 10.1073/pnas.88.16.7046. Proc Natl Acad Sci U S A. 1991. PMID: 1871119 Free PMC article.

8

[S-N transition of the saccharide ring in B-form DNA].

Gorin AA, Ul'ianov NB, Zhurkin VB. Gorin AA, et al. Among authors: zhurkin vb. Mol Biol (Mosk). 1990 Sep-Oct;24(5):1300-13. Mol Biol (Mosk). 1990. PMID: 2290424 Russian.

9

B-DNA twisting correlates with base-pair morphology.

Gorin AA, Zhurkin VB, Olson WK. Gorin AA, et al. Among authors: zhurkin vb. J Mol Biol. 1995 Mar 17;247(1):34-48. doi: 10.1006/jmbi.1994.0120. J Mol Biol. 1995. PMID: 7897660

10

Radioprobing the conformation of DNA in a p53-DNA complex.

Karamychev VN, Wang D, Mazur SJ, Appella E, Neumann RD, Zhurkin VB, Panyutin IG. Karamychev VN, et al. Among authors: zhurkin vb. Int J Radiat Biol. 2012 Dec;88(12):1039-45. doi: 10.3109/09553002.2012.698030. Epub 2012 Jun 21. Int J Radiat Biol. 2012. PMID: 22640875 Free PMC article.

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